RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 FOXK1P85037 733 aa18.61■□□□□ 0.57
DDR1-245ENST00000484556 ZNF177Q13360 481 aaPredicted RBP18.61■□□□□ 0.57
DDR1-245ENST00000484556 ARID5BQ14865 1188 aa18.61■□□□□ 0.57
DDR1-245ENST00000484556 CLCA4Q14CN2 919 aa18.61■□□□□ 0.57
DDR1-245ENST00000484556 SETMARQ53H47 684 aaPredicted RBP18.61■□□□□ 0.57
DDR1-245ENST00000484556 PIK3R6Q5UE93 754 aa18.61■□□□□ 0.57
DDR1-245ENST00000484556 EPM2AIP1Q7L775 607 aaPredicted RBP18.61■□□□□ 0.57
DDR1-245ENST00000484556 TRIM69Q86WT6 500 aa18.61■□□□□ 0.57
DDR1-245ENST00000484556 OR13H1Q8NG92 308 aa18.61■□□□□ 0.57
DDR1-245ENST00000484556 GRAMD1AQ96CP6 724 aa18.61■□□□□ 0.57
DDR1-245ENST00000484556 NT5C1AQ9BXI3 368 aa18.61■□□□□ 0.57
DDR1-245ENST00000484556 HBS1LQ9Y450 684 aaKnown RBP18.61■□□□□ 0.57
DDR1-245ENST00000484556 ITIH6Q6UXX5 1313 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 CCDC187A0A096LP49 1063 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 SCAMP1O15126 338 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 EIF3DO15371 548 aaKnown RBP eCLIP18.6■□□□□ 0.57
DDR1-245ENST00000484556 SLFN14P0C7P3 912 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 SLC5A2P31639 672 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 NUDT1P36639 197 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 TXLNAP40222 546 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 STK19P49842 368 aaPredicted RBP18.6■□□□□ 0.57
DDR1-245ENST00000484556 INCA1Q0VD86 236 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 MAPK8IP2Q13387 824 aaPredicted RBP18.6■□□□□ 0.57
DDR1-245ENST00000484556 SGSM1Q2NKQ1 1148 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 KMT5BQ4FZB7 885 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 PITRM1Q5JRX3 1037 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 VASH2Q86V25 355 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 PIGZQ86VD9 579 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 JAMLQ86YT9 394 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 SLC22A18ASQ8N1D0 253 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 CARNMT1Q8N4J0 409 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 FAM26EQ8N5C1 309 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 TMEM145Q8NBT3 493 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 ZNF507Q8TCN5 953 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 PARD3BQ8TEW8 1205 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 EDEM1Q92611 657 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 PTPRN2Q92932 1015 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 RPL10LQ96L21 214 aaKnown RBP18.6■□□□□ 0.57
DDR1-245ENST00000484556 PRICKLE1Q96MT3 831 aaPredicted RBP18.6■□□□□ 0.57
DDR1-245ENST00000484556 NOX5Q96PH1 765 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 SYNDIG1Q9H7V2 258 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 FBXO2Q9UK22 296 aaPredicted RBP18.6■□□□□ 0.57
DDR1-245ENST00000484556 CEP83Q9Y592 693 aa18.6■□□□□ 0.57
DDR1-245ENST00000484556 SLC31A1O15431 190 aa18.59■□□□□ 0.57
DDR1-245ENST00000484556 EXOC3O60645 756 aa18.59■□□□□ 0.57
DDR1-245ENST00000484556 LATS1O95835 1130 aa18.59■□□□□ 0.57
DDR1-245ENST00000484556 MLLT3P42568 568 aaPredicted RBP18.59■□□□□ 0.57
DDR1-245ENST00000484556 TKTL1P51854 596 aa18.59■□□□□ 0.57
DDR1-245ENST00000484556 DLG4P78352 724 aa18.59■□□□□ 0.57
DDR1-245ENST00000484556 FSCBQ5H9T9 825 aa18.59■□□□□ 0.57
DDR1-245ENST00000484556 PERM1Q5SV97 790 aa18.59■□□□□ 0.57
DDR1-245ENST00000484556 CCDC73Q6ZRK6 1079 aa18.59■□□□□ 0.57
DDR1-245ENST00000484556 BHLHA9Q7RTU4 235 aa18.59■□□□□ 0.57
DDR1-245ENST00000484556 KDM1BQ8NB78 822 aa18.59■□□□□ 0.57
DDR1-245ENST00000484556 FIBINQ8TAL6 211 aa18.59■□□□□ 0.57
DDR1-245ENST00000484556 FAM131CQ96AQ9 280 aa18.59■□□□□ 0.57
DDR1-245ENST00000484556 MYEOVQ96EZ4 313 aa18.59■□□□□ 0.57
DDR1-245ENST00000484556 DUSP23Q9BVJ7 150 aa18.59■□□□□ 0.57
DDR1-245ENST00000484556 ULBP1Q9BZM6 244 aa18.59■□□□□ 0.57
DDR1-245ENST00000484556 KDM4CQ9H3R0 1056 aa18.59■□□□□ 0.57
DDR1-245ENST00000484556 OLA1Q9NTK5 396 aaKnown RBP18.59■□□□□ 0.57
DDR1-245ENST00000484556 DNAJC28Q9NX36 388 aa18.59■□□□□ 0.57
DDR1-245ENST00000484556 PCDHGA4Q9Y5G9 962 aa18.59■□□□□ 0.57
DDR1-245ENST00000484556 NEMP2A6NFY4 417 aa18.58■□□□□ 0.56
DDR1-245ENST00000484556 ASS1P00966 412 aaKnown RBP18.58■□□□□ 0.56
DDR1-245ENST00000484556 SRPRAP08240 638 aaKnown RBP18.58■□□□□ 0.56
DDR1-245ENST00000484556 GJB2P29033 226 aa18.58■□□□□ 0.56
DDR1-245ENST00000484556 AP3M2P53677 418 aa18.58■□□□□ 0.56
DDR1-245ENST00000484556 CLDN2P57739 230 aa18.58■□□□□ 0.56
DDR1-245ENST00000484556 CNTN1Q12860 1018 aa18.58■□□□□ 0.56
DDR1-245ENST00000484556 ELAVL3Q14576 367 aaKnown RBP18.58■□□□□ 0.56
DDR1-245ENST00000484556 ZNF394Q53GI3 561 aa18.58■□□□□ 0.56
DDR1-245ENST00000484556 FAM133BQ5BKY9 247 aaKnown RBP18.58■□□□□ 0.56
DDR1-245ENST00000484556 RAB41Q5JT25 222 aa18.58■□□□□ 0.56
DDR1-245ENST00000484556 MPP7Q5T2T1 576 aa18.58■□□□□ 0.56
DDR1-245ENST00000484556 AGBL4Q5VU57 503 aa18.58■□□□□ 0.56
DDR1-245ENST00000484556 ZCCHC8Q6NZY4 707 aaKnown RBP18.58■□□□□ 0.56
DDR1-245ENST00000484556 C14orf80Q86SX3 495 aa18.58■□□□□ 0.56
DDR1-245ENST00000484556 HTR3CQ8WXA8 447 aa18.58■□□□□ 0.56
DDR1-245ENST00000484556 GEMIN8Q9NWZ8 242 aaKnown RBP18.58■□□□□ 0.56
DDR1-245ENST00000484556 SARDHQ9UL12 918 aa18.58■□□□□ 0.56
DDR1-245ENST00000484556 SRPK3Q9UPE1 567 aa18.58■□□□□ 0.56
DDR1-245ENST00000484556 CLIC4Q9Y696 253 aa18.58■□□□□ 0.56
DDR1-245ENST00000484556 SPTBN1Q01082 2364 aaKnown RBP18.57■□□□□ 0.56
DDR1-245ENST00000484556 ICE1Q9Y2F5 2266 aa18.57■□□□□ 0.56
DDR1-245ENST00000484556 RNGTTO60942 597 aaKnown RBP18.57■□□□□ 0.56
DDR1-245ENST00000484556 ZBED1O96006 694 aa18.57■□□□□ 0.56
DDR1-245ENST00000484556 WT1P19544 449 aaPredicted RBP18.57■□□□□ 0.56
DDR1-245ENST00000484556 PIK3CAP42336 1068 aa18.57■□□□□ 0.56
DDR1-245ENST00000484556 RPS24P62847 133 aaKnown RBP18.57■□□□□ 0.56
DDR1-245ENST00000484556 CLDN10P78369 228 aa18.57■□□□□ 0.56
DDR1-245ENST00000484556 ECT2LQ008S8 904 aa18.57■□□□□ 0.56
DDR1-245ENST00000484556 CDH18Q13634 790 aa18.57■□□□□ 0.56
DDR1-245ENST00000484556 RNF219Q5W0B1 726 aaPredicted RBP18.57■□□□□ 0.56
DDR1-245ENST00000484556 OR6B2Q6IFH4 312 aa18.57■□□□□ 0.56
DDR1-245ENST00000484556 PDILTQ8N807 584 aa18.57■□□□□ 0.56
DDR1-245ENST00000484556 HJURPQ8NCD3 748 aaPredicted RBP18.57■□□□□ 0.56
DDR1-245ENST00000484556 ZNF548Q8NEK5 533 aaPredicted RBP18.57■□□□□ 0.56
DDR1-245ENST00000484556 ZNF564Q8TBZ8 553 aaPredicted RBP18.57■□□□□ 0.56
DDR1-245ENST00000484556 RNF139Q8WU17 664 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms