RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 CHERPQ8IWX8 916 aaKnown RBP20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 HACE1Q8IYU2 909 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 ACVR1CQ8NER5 493 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 RP9Q8TA86 221 aaKnown RBP20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 SNRNP27Q8WVK2 155 aaKnown RBP20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 MARK4Q96L34 752 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 SPATA13Q96N96 652 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 PRDM16Q9HAZ2 1276 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 DESP17661 470 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 TCN1P20061 433 aaPredicted RBP20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 MGAT5BQ3V5L5 792 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 ACBD5Q5T8D3 534 aaPredicted RBP20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 NCBP2-AS2Q69YL0 99 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 ZSCAN18Q8TBC5 510 aaPredicted RBP20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 PDCD6IPQ8WUM4 868 aaKnown RBP20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 TEPSINQ96N21 525 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 CSPG4P5Q96PW8 444 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 KCTD15Q96SI1 283 aaPredicted RBP20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 AGAP2Q99490 1192 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 CDT1Q9H211 546 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 RPF1Q9H9Y2 349 aaKnown RBP20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 WDR41Q9HAD4 459 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 TXNDC16Q9P2K2 825 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 PADI4Q9UM07 663 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 RLFQ13129 1914 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 ONECUT3O60422 494 aaPredicted RBP20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 TRIM13O60858 407 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 JUNP05412 331 aaKnown RBP20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 UBA1P22314 1058 aaKnown RBP20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 ME2P23368 584 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 COG7P83436 770 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 DPYSL2Q16555 572 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 IL23RQ5VWK5 629 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 FSTL4Q6MZW2 842 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 PYROXD2Q8N2H3 581 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 TSPAN14Q8NG11 270 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 CERS2Q96G23 380 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 ZNF385DQ9H6B1 395 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 PSME4Q14997 1843 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 COL4A5P29400 1685 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 TMEM114B3SHH9 223 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 GRID2O43424 1007 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 PGGT1BP53609 377 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 NAB1Q13506 487 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 GOLGA7BQ2TAP0 167 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 SH3D19Q5HYK7 790 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 IER5Q5VY09 327 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 ZBTB8OSQ8IWT0 167 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 PGAM4Q8N0Y7 254 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 NLRP7Q8WX94 980 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 ISL2Q96A47 359 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 NUF2Q9BZD4 464 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 MINDY3Q9H8M7 445 aa20.17■□□□□ 0.82
RPUSD3-216ENST00000484134 A0A096LPK6 155 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 PAPSS1O43252 624 aaPredicted RBP20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 PSMC3P17980 439 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 TPP2P29144 1249 aaPredicted RBP20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 ICAM3P32942 547 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 NR2C2P49116 596 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 SLC6A3Q01959 620 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 STXBP2Q15833 593 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 PTAR1Q7Z6K3 402 aaPredicted RBP20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 CLEC14AQ86T13 490 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 RBBP8Q99708 897 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 CPNE1Q99829 537 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 ILKAPQ9H0C8 392 aaPredicted RBP20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 VPS33BQ9H267 617 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 SEMA6AQ9H2E6 1030 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 EPS15L1Q9UBC2 864 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 RSL24D1Q9UHA3 163 aaKnown RBP20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 BARX2Q9UMQ3 279 aaPredicted RBP20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 LCTP09848 1927 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 INO80B-WBP1J3KQ70 363 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 FARP2O94887 1054 aaPredicted RBP20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 IQCF3P0C7M6 154 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 PSMB4P28070 264 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 HSPA13P48723 471 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 LPIN1Q14693 890 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 GRTP1Q5TC63 336 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 TRIM67Q6ZTA4 783 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 STRA8Q7Z7C7 330 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 TTC30AQ86WT1 665 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 CPSF7Q8N684 471 aaKnown RBP20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 CCDC185Q8N715 623 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 ATP6V1E2Q96A05 226 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 HPDLQ96IR7 371 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 CCT7Q99832 543 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 PDZD7Q9H5P4 517 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 COQ10BQ9H8M1 238 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 CYP3A43Q9HB55 503 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 GGA3Q9NZ52 723 aa20.16■□□□□ 0.82
RPUSD3-216ENST00000484134 ZBTB42B2RXF5 422 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 ACKR2O00590 384 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 HDAC3O15379 428 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 ZNF23P17027 643 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 GOT1P17174 413 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 TMEM132AQ24JP5 1023 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 PPP1R26Q5T8A7 1209 aaPredicted RBP20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 MIPOL1Q8TD10 442 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 CLEC4CQ8WTT0 213 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms