RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	ZNF446	Q9NWS9	450 aa		11.51	□□□□□ -0.57
APTX-223	ENST00000479656	ZNF212	Q9UDV6	495 aa		11.51	□□□□□ -0.57
APTX-223	ENST00000479656	STOML2	Q9UJZ1	356 aa		11.51	□□□□□ -0.57
APTX-223	ENST00000479656	LSM7	Q9UK45	103 aa	Known RBP	11.51	□□□□□ -0.57
APTX-223	ENST00000479656	CCL26	Q9Y258	94 aa		11.51	□□□□□ -0.57
APTX-223	ENST00000479656	MRPS23	Q9Y3D9	190 aa	Known RBP	11.51	□□□□□ -0.57
APTX-223	ENST00000479656	CDH23	Q9H251	3354 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	C5orf60	A6NFR6	353 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	GCAT	O75600	419 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	LATS1	O95835	1130 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	GLP2R	O95838	553 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	CEBPB	P17676	345 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	OR1E1	P30953	314 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	TNNT3	P45378	269 aa	Predicted RBP	11.5	□□□□□ -0.57
APTX-223	ENST00000479656	WASHC5	Q12768	1159 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	RABGAP1L	Q5R372	815 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	RARS2	Q5T160	578 aa	Known RBP	11.5	□□□□□ -0.57
APTX-223	ENST00000479656	HIBCH	Q6NVY1	386 aa	Predicted RBP	11.5	□□□□□ -0.57
APTX-223	ENST00000479656	EMB	Q6PCB8	327 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	BBS7	Q8IWZ6	715 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	CCDC13	Q8IYE1	715 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	BBOF1	Q8ND07	529 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	SH3RF2	Q8TEC5	729 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	USP13	Q92995	863 aa	Predicted RBP	11.5	□□□□□ -0.57
APTX-223	ENST00000479656	FMO2	Q99518	471 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	BRD8	Q9H0E9	1235 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	SFXN1	Q9H9B4	322 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	DONSON	Q9NYP3	566 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	PAK5	Q9P286	719 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	ARHGAP26	Q9UNA1	814 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	TNRC18	O15417	2968 aa	Predicted RBP	11.5	□□□□□ -0.57
APTX-223	ENST00000479656	NUP205	Q92621	2012 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	NOTCH4	Q99466	2003 aa		11.5	□□□□□ -0.57
APTX-223	ENST00000479656	RASA4B	C9J798	803 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	RASA4	O43374	803 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	MAFK	O60675	156 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	METTL18	O95568	372 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	CCNC	P24863	283 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	NUMB	P49757	651 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	NDST2	P52849	883 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	CDH4	P55283	916 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	BASP1	P80723	227 aa	Known RBP	11.49	□□□□□ -0.57
APTX-223	ENST00000479656	ANKRD20A2	Q5SQ80	823 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	RNASEH2B	Q5TBB1	312 aa	Known RBP	11.49	□□□□□ -0.57
APTX-223	ENST00000479656	ANKRD20A1	Q5TYW2	823 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	ANKRD20A3	Q5VUR7	823 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	RHBDF2	Q6PJF5	856 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	CPT1B	Q92523	772 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	CAVIN3	Q969G5	261 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	TMA16	Q96EY4	203 aa	Known RBP	11.49	□□□□□ -0.57
APTX-223	ENST00000479656	HMCES	Q96FZ2	354 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	PWWP2A	Q96N64	755 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	TSGA13	Q96PP4	275 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	FERMT1	Q9BQL6	677 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	RAB6B	Q9NRW1	208 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	TDP1	Q9NUW8	608 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	CDH22	Q9UJ99	828 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656		A0A0A0MRY4	1105 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	TCRBV7S3A2	A0A539	114 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	SOBP	A7XYQ1	873 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	RNF103	O00237	685 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	PAPLN	O95428	1278 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	MAPKAPK2	P49137	400 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	CAV1	Q03135	178 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	POLD3	Q15054	466 aa	Predicted RBP	11.49	□□□□□ -0.57
APTX-223	ENST00000479656	SYCP2L	Q5T4T6	812 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	FAXC	Q5TGI0	409 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	ANKRD22	Q5VYY1	191 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	TMEM184A	Q6ZMB5	413 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	PID1	Q7Z2X4	250 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	PCGF5	Q86SE9	256 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	ARID3B	Q8IVW6	561 aa	Predicted RBP	11.49	□□□□□ -0.57
APTX-223	ENST00000479656	ZNF567	Q8N184	647 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	ATPAF2	Q8N5M1	289 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	EFHB	Q8N7U6	833 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	OR52K2	Q8NGK3	314 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	RIN3	Q8TB24	985 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	SPATA13	Q96N96	652 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	ETNK1	Q9HBU6	452 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	DZANK1	Q9NVP4	752 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	MTRF1L	Q9UGC7	380 aa	Known RBP	11.49	□□□□□ -0.57
APTX-223	ENST00000479656	ZNF510	Q9Y2H8	683 aa		11.49	□□□□□ -0.57
APTX-223	ENST00000479656	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.48	□□□□□ -0.57
APTX-223	ENST00000479656	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	11.48	□□□□□ -0.57
APTX-223	ENST00000479656	ARHGAP42	A6NI28	874 aa		11.48	□□□□□ -0.57
APTX-223	ENST00000479656		F5H423	210 aa	Predicted RBP	11.48	□□□□□ -0.57
APTX-223	ENST00000479656	RAMP2	O60895	175 aa		11.48	□□□□□ -0.57
APTX-223	ENST00000479656	TBL1X	O60907	577 aa		11.48	□□□□□ -0.57
APTX-223	ENST00000479656	CLDN11	O75508	207 aa		11.48	□□□□□ -0.57
APTX-223	ENST00000479656	STK10	O94804	968 aa	Known RBP	11.48	□□□□□ -0.57
APTX-223	ENST00000479656	PRAMEF12	O95522	483 aa		11.48	□□□□□ -0.57
APTX-223	ENST00000479656	JCHAIN	P01591	159 aa		11.48	□□□□□ -0.57
APTX-223	ENST00000479656	PTPN3	P26045	913 aa		11.48	□□□□□ -0.57
APTX-223	ENST00000479656	CHKA	P35790	457 aa		11.48	□□□□□ -0.57
APTX-223	ENST00000479656	ZBTB17	Q13105	803 aa		11.48	□□□□□ -0.57
APTX-223	ENST00000479656	ZNF177	Q13360	481 aa	Predicted RBP	11.48	□□□□□ -0.57
APTX-223	ENST00000479656	TEX44	Q53QW1	395 aa		11.48	□□□□□ -0.57
APTX-223	ENST00000479656	ANKRD54	Q6NXT1	300 aa		11.48	□□□□□ -0.57
APTX-223	ENST00000479656	ARHGEF18	Q6ZSZ5	1173 aa		11.48	□□□□□ -0.57
APTX-223	ENST00000479656	GPR149	Q86SP6	731 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms