RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 MYO6Q9UM54 1294 aa16.03■□□□□ 0.16
COMMD6-209ENST00000477377 MED19A0JLT2 244 aaPredicted RBP16.02■□□□□ 0.16
COMMD6-209ENST00000477377 LRRC53A6NM62 1247 aa16.02■□□□□ 0.16
COMMD6-209ENST00000477377 ZBTB24O43167 697 aaPredicted RBP16.02■□□□□ 0.16
COMMD6-209ENST00000477377 FERP16591 822 aa16.02■□□□□ 0.16
COMMD6-209ENST00000477377 SDHBP21912 280 aa16.02■□□□□ 0.16
COMMD6-209ENST00000477377 RDXP35241 583 aaKnown RBP16.02■□□□□ 0.16
COMMD6-209ENST00000477377 RFC1P35251 1148 aaPredicted RBP16.02■□□□□ 0.16
COMMD6-209ENST00000477377 STK19P49842 368 aaPredicted RBP16.02■□□□□ 0.16
COMMD6-209ENST00000477377 VASPP50552 380 aaPredicted RBP16.02■□□□□ 0.16
COMMD6-209ENST00000477377 CDH4P55283 916 aa16.02■□□□□ 0.16
COMMD6-209ENST00000477377 ATP11AP98196 1134 aa16.02■□□□□ 0.16
COMMD6-209ENST00000477377 NUMA1Q14980 2115 aa16.02■□□□□ 0.16
COMMD6-209ENST00000477377 AASDHQ4L235 1098 aaPredicted RBP16.02■□□□□ 0.16
COMMD6-209ENST00000477377 STPG1Q5TH74 334 aa16.02■□□□□ 0.16
COMMD6-209ENST00000477377 SLC23A3Q6PIS1 610 aa16.02■□□□□ 0.16
COMMD6-209ENST00000477377 FAM131BQ86XD5 332 aa16.02■□□□□ 0.16
COMMD6-209ENST00000477377 CACUL1Q86Y37 369 aa16.02■□□□□ 0.16
COMMD6-209ENST00000477377 C12orf50Q8NA57 414 aaPredicted RBP16.02■□□□□ 0.16
COMMD6-209ENST00000477377 MSANTD4Q8NCY6 345 aa16.02■□□□□ 0.16
COMMD6-209ENST00000477377 HAPLN3Q96S86 360 aa16.02■□□□□ 0.16
COMMD6-209ENST00000477377 PSMB7Q99436 277 aa16.02■□□□□ 0.16
COMMD6-209ENST00000477377 FEM1AQ9BSK4 669 aa16.02■□□□□ 0.16
COMMD6-209ENST00000477377 FSCN3Q9NQT6 498 aa16.02■□□□□ 0.16
COMMD6-209ENST00000477377 AIPL1Q9NZN9 384 aa16.02■□□□□ 0.16
COMMD6-209ENST00000477377 ADAM22Q9P0K1 906 aa16.02■□□□□ 0.16
COMMD6-209ENST00000477377 PCDH15Q96QU1 1955 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 KHNYNO15037 678 aaKnown RBP16.01■□□□□ 0.15
COMMD6-209ENST00000477377 CLDN11O75508 207 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 VAV1P15498 845 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 MAOBP27338 520 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 ACSL1P33121 698 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 PTPN9P43378 593 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 NSFP46459 744 aaKnown RBP16.01■□□□□ 0.15
COMMD6-209ENST00000477377 HDAC4P56524 1084 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 TRIM61Q5EBN2 209 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 ACAD10Q6JQN1 1059 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 WDR59Q6PJI9 974 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 DNAAF5Q86Y56 855 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 C3orf20Q8ND61 904 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 C1orf216Q8TAB5 229 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 DNASE2BQ8WZ79 361 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 HSPA12BQ96MM6 686 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 GPR174Q9BXC1 333 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 CAPN10Q9HC96 672 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 TMEM51Q9NW97 253 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 MPP6Q9NZW5 540 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 NEU3Q9UQ49 428 aa16.01■□□□□ 0.15
COMMD6-209ENST00000477377 PI4KAP42356 2102 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16■□□□□ 0.15
COMMD6-209ENST00000477377 TARSL2A2RTX5 802 aaKnown RBP16■□□□□ 0.15
COMMD6-209ENST00000477377 SIGLEC16A6NMB1 481 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 METTL12A8MUP2 240 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 E9PAM4 449 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 FAM72CH0Y354 149 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 KRT3P12035 628 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 OXTRP30559 389 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 ADRA1BP35368 520 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 PRKCIP41743 596 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 RPL7AP62424 266 aaKnown RBP16■□□□□ 0.15
COMMD6-209ENST00000477377 FANCCQ00597 558 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 OGDHQ02218 1023 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 C1QBPQ07021 282 aaKnown RBP16■□□□□ 0.15
COMMD6-209ENST00000477377 ZNF177Q13360 481 aaPredicted RBP16■□□□□ 0.15
COMMD6-209ENST00000477377 ZSCAN23Q3MJ62 389 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 FAM72AQ5TYM5 149 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 MANEALQ5VSG8 457 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 FAM72DQ6L9T8 149 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 SND1Q7KZF4 910 aaKnown RBP eCLIP16■□□□□ 0.15
COMMD6-209ENST00000477377 STRADAQ7RTN6 431 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 ZNF571Q7Z3V5 609 aaPredicted RBP16■□□□□ 0.15
COMMD6-209ENST00000477377 FAM72BQ86X60 149 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 MCOLN2Q8IZK6 566 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 CADM4Q8NFZ8 388 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 EDEM2Q9BV94 578 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 NUP58Q9BVL2 599 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 FBRSQ9HAH7 460 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 SERGEFQ9UGK8 458 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 SLCO1B1Q9Y6L6 691 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 DOCK4Q8N1I0 1966 aa16■□□□□ 0.15
COMMD6-209ENST00000477377 A0A0D9SEW6 157 aa15.99■□□□□ 0.15
COMMD6-209ENST00000477377 C4orf47A7E2U8 309 aa15.99■□□□□ 0.15
COMMD6-209ENST00000477377 ATP9BO43861 1147 aa15.99■□□□□ 0.15
COMMD6-209ENST00000477377 NDUFS2O75306 463 aa15.99■□□□□ 0.15
COMMD6-209ENST00000477377 MOCS3O95396 460 aa15.99■□□□□ 0.15
COMMD6-209ENST00000477377 MT-CO1P00395 513 aa15.99■□□□□ 0.15
COMMD6-209ENST00000477377 CALB1P05937 261 aa15.99■□□□□ 0.15
COMMD6-209ENST00000477377 RRM1P23921 792 aa15.99■□□□□ 0.15
COMMD6-209ENST00000477377 HOXD12P35452 270 aa15.99■□□□□ 0.15
COMMD6-209ENST00000477377 ST8SIA6P61647 398 aa15.99■□□□□ 0.15
COMMD6-209ENST00000477377 NRG1Q02297 640 aaPredicted RBP15.99■□□□□ 0.15
COMMD6-209ENST00000477377 ZBTB16Q05516 673 aa15.99■□□□□ 0.15
COMMD6-209ENST00000477377 CDO1Q16878 200 aa15.99■□□□□ 0.15
COMMD6-209ENST00000477377 FILIP1LQ4L180 1135 aa15.99■□□□□ 0.15
COMMD6-209ENST00000477377 FIGNQ5HY92 759 aa15.99■□□□□ 0.15
COMMD6-209ENST00000477377 RNF219Q5W0B1 726 aaPredicted RBP15.99■□□□□ 0.15
COMMD6-209ENST00000477377 CCDC117Q8IWD4 279 aaPredicted RBP15.99■□□□□ 0.15
COMMD6-209ENST00000477377 CCDC185Q8N715 623 aa15.99■□□□□ 0.15
COMMD6-209ENST00000477377 ORAI3Q9BRQ5 295 aa15.99■□□□□ 0.15
COMMD6-209ENST00000477377 EDEM3Q9BZQ6 932 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms