RNA–Protein interactions for RNA: ENST00000476289.5

CHKB-207, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-207ENST00000476289 ERGIC2Q96RQ1 377 aa33.17■■■□□ 2.9
CHKB-207ENST00000476289 SUSD2Q9UGT4 822 aa33.17■■■□□ 2.9
CHKB-207ENST00000476289 GIPC1O14908 333 aa33.16■■■□□ 2.9
CHKB-207ENST00000476289 MMP8P22894 467 aa33.16■■■□□ 2.9
CHKB-207ENST00000476289 PLK1P53350 603 aa33.16■■■□□ 2.9
CHKB-207ENST00000476289 C5orf22Q49AR2 442 aa33.16■■■□□ 2.9
CHKB-207ENST00000476289 ANO6Q4KMQ2 910 aa33.16■■■□□ 2.9
CHKB-207ENST00000476289 N4BP2L1Q5TBK1 243 aaPredicted RBP33.16■■■□□ 2.9
CHKB-207ENST00000476289 RNF219Q5W0B1 726 aaPredicted RBP33.16■■■□□ 2.9
CHKB-207ENST00000476289 BNIPLQ7Z465 357 aa33.16■■■□□ 2.9
CHKB-207ENST00000476289 ZNF683Q8IZ20 524 aa33.16■■■□□ 2.9
CHKB-207ENST00000476289 ZCCHC9Q8N567 271 aaKnown RBP33.16■■■□□ 2.9
CHKB-207ENST00000476289 SLC30A5Q8TAD4 765 aa33.16■■■□□ 2.9
CHKB-207ENST00000476289 CFAP57Q96MR6 1250 aa33.16■■■□□ 2.9
CHKB-207ENST00000476289 C6orf106Q9H6K1 298 aaPredicted RBP33.16■■■□□ 2.9
CHKB-207ENST00000476289 METTL5Q9NRN9 209 aaKnown RBP33.16■■■□□ 2.9
CHKB-207ENST00000476289 ARHGAP33O14559 1287 aa33.15■■■□□ 2.9
CHKB-207ENST00000476289 F9P00740 461 aa33.15■■■□□ 2.9
CHKB-207ENST00000476289 NOVA1P51513 510 aaKnown RBP33.15■■■□□ 2.9
CHKB-207ENST00000476289 TTC31Q49AM3 519 aaPredicted RBP33.15■■■□□ 2.9
CHKB-207ENST00000476289 SH3PXD2AQ5TCZ1 1133 aa33.15■■■□□ 2.9
CHKB-207ENST00000476289 SND1Q7KZF4 910 aaKnown RBP eCLIP33.15■■■□□ 2.9
CHKB-207ENST00000476289 EMC1Q8N766 993 aa33.15■■■□□ 2.9
CHKB-207ENST00000476289 PCDHB18PQ96TA0 734 aa33.15■■■□□ 2.9
CHKB-207ENST00000476289 MIR1-1HGQ9H1L0 117 aa33.15■■■□□ 2.9
CHKB-207ENST00000476289 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP33.14■■■□□ 2.9
CHKB-207ENST00000476289 EDDM13A0A1B0GTR0 161 aa33.14■■■□□ 2.9
CHKB-207ENST00000476289 CNTN5O94779 1100 aa33.14■■■□□ 2.9
CHKB-207ENST00000476289 GNSP15586 552 aa33.14■■■□□ 2.9
CHKB-207ENST00000476289 ATXN3P54252 364 aaPredicted RBP33.14■■■□□ 2.9
CHKB-207ENST00000476289 ZNF177Q13360 481 aaPredicted RBP33.14■■■□□ 2.9
CHKB-207ENST00000476289 PHLDB2Q86SQ0 1253 aa33.14■■■□□ 2.9
CHKB-207ENST00000476289 MINDY1Q8N5J2 469 aa33.14■■■□□ 2.9
CHKB-207ENST00000476289 C11orf70Q9BRQ4 267 aa33.14■■■□□ 2.9
CHKB-207ENST00000476289 PCED1AQ9H1Q7 454 aa33.14■■■□□ 2.9
CHKB-207ENST00000476289 PABPC3Q9H361 631 aaKnown RBP33.14■■■□□ 2.9
CHKB-207ENST00000476289 SERGEFQ9UGK8 458 aa33.14■■■□□ 2.9
CHKB-207ENST00000476289 EIF2B4Q9UI10 523 aaKnown RBP33.14■■■□□ 2.9
CHKB-207ENST00000476289 TARSL2A2RTX5 802 aaKnown RBP33.13■■■□□ 2.89
CHKB-207ENST00000476289 CLDN11O75508 207 aa33.13■■■□□ 2.89
CHKB-207ENST00000476289 SEMA4FO95754 770 aa33.13■■■□□ 2.89
CHKB-207ENST00000476289 VAV1P15498 845 aa33.13■■■□□ 2.89
CHKB-207ENST00000476289 OXCT1P55809 520 aa33.13■■■□□ 2.89
CHKB-207ENST00000476289 ALFQ53S48 1182 aa33.13■■■□□ 2.89
CHKB-207ENST00000476289 ARTNQ5T4W7 220 aa33.13■■■□□ 2.89
CHKB-207ENST00000476289 TRIM72Q6ZMU5 477 aa33.13■■■□□ 2.89
CHKB-207ENST00000476289 ARCQ7LC44 396 aa33.13■■■□□ 2.89
CHKB-207ENST00000476289 PTPRN2Q92932 1015 aa33.13■■■□□ 2.89
CHKB-207ENST00000476289 FEM1AQ9BSK4 669 aa33.13■■■□□ 2.89
CHKB-207ENST00000476289 BTBD1Q9H0C5 482 aa33.13■■■□□ 2.89
CHKB-207ENST00000476289 TBC1D30Q9Y2I9 924 aa33.13■■■□□ 2.89
CHKB-207ENST00000476289 OR51B4Q9Y5P0 310 aa33.13■■■□□ 2.89
CHKB-207ENST00000476289 SLCO1B1Q9Y6L6 691 aa33.13■■■□□ 2.89
CHKB-207ENST00000476289 A0A1B0GTW7 788 aa33.12■■■□□ 2.89
CHKB-207ENST00000476289 UNGP13051 313 aaPredicted RBP33.12■■■□□ 2.89
CHKB-207ENST00000476289 CDH4P55283 916 aa33.12■■■□□ 2.89
CHKB-207ENST00000476289 SULT2A1Q06520 285 aa33.12■■■□□ 2.89
CHKB-207ENST00000476289 CST6Q15828 149 aa33.12■■■□□ 2.89
CHKB-207ENST00000476289 CAVIN1Q6NZI2 390 aaKnown RBP33.12■■■□□ 2.89
CHKB-207ENST00000476289 MMAAQ8IVH4 418 aaKnown RBP33.12■■■□□ 2.89
CHKB-207ENST00000476289 STK40Q8N2I9 435 aa33.12■■■□□ 2.89
CHKB-207ENST00000476289 C1orf216Q8TAB5 229 aa33.12■■■□□ 2.89
CHKB-207ENST00000476289 FAM129BQ96TA1 746 aa33.12■■■□□ 2.89
CHKB-207ENST00000476289 ZBTB32Q9Y2Y4 487 aaPredicted RBP33.12■■■□□ 2.89
CHKB-207ENST00000476289 PAXBP1Q9Y5B6 917 aa33.12■■■□□ 2.89
CHKB-207ENST00000476289 MID1O15344 667 aa33.11■■■□□ 2.89
CHKB-207ENST00000476289 SYPP08247 313 aa33.11■■■□□ 2.89
CHKB-207ENST00000476289 CSRP1P21291 193 aaKnown RBP33.11■■■□□ 2.89
CHKB-207ENST00000476289 RDXP35241 583 aaKnown RBP33.11■■■□□ 2.89
CHKB-207ENST00000476289 PTP4A2Q12974 167 aa33.11■■■□□ 2.89
CHKB-207ENST00000476289 RAB6CQ53S08 254 aa33.11■■■□□ 2.89
CHKB-207ENST00000476289 FAM131BQ86XD5 332 aa33.11■■■□□ 2.89
CHKB-207ENST00000476289 SNX19Q92543 992 aa33.11■■■□□ 2.89
CHKB-207ENST00000476289 NAT10Q9H0A0 1025 aaKnown RBP33.11■■■□□ 2.89
CHKB-207ENST00000476289 RAB6CQ9H0N0 254 aa33.11■■■□□ 2.89
CHKB-207ENST00000476289 RNASEH1O60930 286 aaKnown RBP33.1■■■□□ 2.89
CHKB-207ENST00000476289 GJB6O95452 261 aa33.1■■■□□ 2.89
CHKB-207ENST00000476289 ATP11AP98196 1134 aa33.1■■■□□ 2.89
CHKB-207ENST00000476289 GRIK2Q13002 908 aa33.1■■■□□ 2.89
CHKB-207ENST00000476289 USP30Q70CQ3 517 aa33.1■■■□□ 2.89
CHKB-207ENST00000476289 DEFB124Q8NES8 71 aa33.1■■■□□ 2.89
CHKB-207ENST00000476289 JOSD2Q8TAC2 188 aa33.1■■■□□ 2.89
CHKB-207ENST00000476289 FRS2Q8WU20 508 aa33.1■■■□□ 2.89
CHKB-207ENST00000476289 BPIFA3Q9BQP9 254 aa33.1■■■□□ 2.89
CHKB-207ENST00000476289 FBXL12Q9NXK8 326 aa33.1■■■□□ 2.89
CHKB-207ENST00000476289 VPS28Q9UK41 221 aa33.1■■■□□ 2.89
CHKB-207ENST00000476289 SCML1Q9UN30 329 aa33.1■■■□□ 2.89
CHKB-207ENST00000476289 TPRP12270 2363 aaKnown RBP33.1■■■□□ 2.89
CHKB-207ENST00000476289 CHD8Q9HCK8 2581 aa33.09■■■□□ 2.89
CHKB-207ENST00000476289 DRGXA6NNA5 263 aa33.09■■■□□ 2.89
CHKB-207ENST00000476289 BCAT2O15382 392 aaPredicted RBP33.09■■■□□ 2.89
CHKB-207ENST00000476289 TEX33O43247 280 aa33.09■■■□□ 2.89
CHKB-207ENST00000476289 PSMD8P48556 350 aa33.09■■■□□ 2.89
CHKB-207ENST00000476289 SEMA3BQ13214 749 aa33.09■■■□□ 2.89
CHKB-207ENST00000476289 CLEC16AQ2KHT3 1053 aa33.09■■■□□ 2.89
CHKB-207ENST00000476289 GANCQ8TET4 914 aa33.09■■■□□ 2.89
CHKB-207ENST00000476289 C1orf74Q96LT6 269 aa33.09■■■□□ 2.89
CHKB-207ENST00000476289 SGK2Q9HBY8 427 aa33.09■■■□□ 2.89
CHKB-207ENST00000476289 TMEM51Q9NW97 253 aa33.09■■■□□ 2.89
CHKB-207ENST00000476289 MPP6Q9NZW5 540 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms