RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 CNGA3Q16281 694 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 SMTNL2Q2TAL5 461 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 CAPRIN2Q6IMN6 1127 aaKnown RBP4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 NFRKBQ6P4R8 1299 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 C16orf89Q6UX73 402 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 RAB11FIP2Q7L804 512 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 MOGAT3Q86VF5 341 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 TTC30AQ86WT1 665 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 OR4N4Q8N0Y3 316 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 BCAS4Q8TDM0 211 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 WDR60Q8WVS4 1066 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 OVCA2Q8WZ82 227 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 NPIPB3Q92617 1050 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 CELF1Q92879 486 aaKnown RBP4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 EME1Q96AY2 570 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 GCC1Q96CN9 775 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 MECRQ9BV79 373 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 THSD1Q9NS62 852 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 RXFP3Q9NSD7 469 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 ABHD10Q9NUJ1 306 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 PCDHB7Q9Y5E2 793 aa4.02□□□□□ -1.77
TMEM50B-208ENST00000474272 EME2A4GXA9 379 aaPredicted RBP4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 A6NNC1 897 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 SLC38A8A6NNN8 435 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 B9A039 149 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 H0Y3Z8 333 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 PRYO14603 147 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 IRAK2O43187 625 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 GAS8-AS1O95177 125 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 CHRNB1P11230 501 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 ADD2P35612 726 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 PGGT1BP53609 377 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 ARL4CP56559 192 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 SF3A3Q12874 501 aaKnown RBP eCLIP4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 PPFIA1Q13136 1202 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 SEMA3BQ13214 749 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 BIRC3Q13489 604 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 CUL4BQ13620 913 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 NFATC4Q14934 902 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 GALNTL6Q49A17 601 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 ATPAF1Q5TC12 328 aaPredicted RBP4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 RRAGAQ7L523 313 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 KRT27Q7Z3Y8 459 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 CCDC117Q8IWD4 279 aaPredicted RBP4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 SPPL3Q8TCT6 385 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 THAP4Q8WY91 577 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 EVI5LQ96CN4 794 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 EIF3CQ99613 913 aaKnown RBP4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 NTPCRQ9BSD7 190 aaKnown RBP4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 FAM167BQ9BTA0 163 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 RBM38Q9H0Z9 239 aaKnown RBP4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 ELAC1Q9H777 363 aaKnown RBP4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 SAYSD1Q9NPB0 183 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 PAPOLBQ9NRJ5 636 aaKnown RBP4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 FBXO28Q9NVF7 368 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 FEM1BQ9UK73 627 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 C19orf53Q9UNZ5 99 aaPredicted RBP4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 LZTS1Q9Y250 596 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 UBE2J1Q9Y385 318 aaPredicted RBP4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 INSL5Q9Y5Q6 135 aa4.01□□□□□ -1.77
TMEM50B-208ENST00000474272 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4□□□□□ -1.77
TMEM50B-208ENST00000474272 ERVV-2B6SEH9 535 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 CYP21A2P08686 494 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 HSD3B1P14060 373 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 IGHMBP2P38935 993 aaKnown RBP4□□□□□ -1.77
TMEM50B-208ENST00000474272 SOX2P48431 317 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 CCT5P48643 541 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 AAK1Q2M2I8 961 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 ZNF354CQ86Y25 554 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 SMAP1Q8IYB5 467 aaPredicted RBP4□□□□□ -1.77
TMEM50B-208ENST00000474272 ARL14EPQ8N8R7 260 aaPredicted RBP4□□□□□ -1.77
TMEM50B-208ENST00000474272 CSGALNACT1Q8TDX6 532 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 DNASE2BQ8WZ79 361 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 RUBCNQ92622 972 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 ATP2A3Q93084 1043 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 TRIM63Q969Q1 353 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 P2RY11Q96G91 374 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 MED30Q96HR3 178 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 FAM84BQ96KN1 310 aaPredicted RBP4□□□□□ -1.77
TMEM50B-208ENST00000474272 TRAPPC9Q96Q05 1148 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 MEIS3Q99687 375 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 TAF1DQ9H5J8 278 aaPredicted RBP4□□□□□ -1.77
TMEM50B-208ENST00000474272 NOL12Q9UGY1 213 aaKnown RBP eCLIP4□□□□□ -1.77
TMEM50B-208ENST00000474272 UTS2RQ9UKP6 389 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 AGO2Q9UKV8 859 aaKnown RBP4□□□□□ -1.77
TMEM50B-208ENST00000474272 NFU1Q9UMS0 254 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 PCDHA7Q9UN72 937 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 ZBTB1Q9Y2K1 713 aa4□□□□□ -1.77
TMEM50B-208ENST00000474272 FAM90A20PA6NIJ5 464 aa3.99□□□□□ -1.77
TMEM50B-208ENST00000474272 NKX2-8O15522 239 aa3.99□□□□□ -1.77
TMEM50B-208ENST00000474272 USP12O75317 370 aa3.99□□□□□ -1.77
TMEM50B-208ENST00000474272 PEPDP12955 493 aa3.99□□□□□ -1.77
TMEM50B-208ENST00000474272 MT3P25713 68 aa3.99□□□□□ -1.77
TMEM50B-208ENST00000474272 CDK7P50613 346 aa3.99□□□□□ -1.77
TMEM50B-208ENST00000474272 LTBQ06643 244 aa3.99□□□□□ -1.77
TMEM50B-208ENST00000474272 PGM5Q15124 567 aa3.99□□□□□ -1.77
TMEM50B-208ENST00000474272 TTLL5Q6EMB2 1281 aa3.99□□□□□ -1.77
TMEM50B-208ENST00000474272 ACSM6Q6P461 480 aa3.99□□□□□ -1.77
TMEM50B-208ENST00000474272 CYP26C1Q6V0L0 522 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms