RNA–Protein interactions for RNA: ENST00000471364.1

RUBCN-208, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 3

Gene RUBCN, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-208ENST00000471364 C1QTNF9P0C862 333 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 CEACAM1P13688 526 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 LCP1P13796 627 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 PDGFRAP16234 1089 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 MIPP30301 263 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 PTPN7P35236 360 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 FLT3P36888 993 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 SCNN1AP37088 669 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 ACADSBP45954 432 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 KCNJ1P48048 391 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 COPS2P61201 443 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 FOXC1Q12948 553 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 TAF5Q15542 800 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 FAM153CQ494X1 144 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 ZFYVE27Q5T4F4 411 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 SH3PXD2AQ5TCZ1 1133 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 DUPD1Q68J44 220 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 CYP2U1Q7Z449 544 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 SPATA2LQ8IUW3 424 aaPredicted RBP13.12□□□□□ -0.31
RUBCN-208ENST00000471364 SCUBE3Q8IX30 993 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 KRT222Q8N1A0 295 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 SPATA18Q8TC71 538 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 CLEC4CQ8WTT0 213 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.12□□□□□ -0.31
RUBCN-208ENST00000471364 SLC22A12Q96S37 553 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 ERP44Q9BS26 406 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 UBXN6Q9BZV1 441 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 ZWILCHQ9H900 591 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 FAM153AQ9UHL3 310 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 RASAL2Q9UJF2 1139 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 CDH9Q9ULB4 789 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 HPCAL4Q9UM19 191 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 INVSQ9Y283 1065 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 UTP11Q9Y3A2 253 aaKnown RBP13.12□□□□□ -0.31
RUBCN-208ENST00000471364 MYOFQ9NZM1 2061 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 hCG_1818297A0A087WSY0 165 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 LRRD1A4D1F6 860 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 C3orf70A6NLC5 250 aaPredicted RBP13.11□□□□□ -0.31
RUBCN-208ENST00000471364 NFATC1O95644 943 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 KRT7P08729 469 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 KRT10P13645 584 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 TCF3P15923 654 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 CSRP1P21291 193 aaKnown RBP13.11□□□□□ -0.31
RUBCN-208ENST00000471364 PCSK1P29120 753 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 PCK1P35558 622 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 SNX1Q13596 522 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 HLTFQ14527 1009 aaKnown RBP eCLIP13.11□□□□□ -0.31
RUBCN-208ENST00000471364 C15orf59Q2T9L4 293 aaPredicted RBP13.11□□□□□ -0.31
RUBCN-208ENST00000471364 CCDC14Q49A88 953 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 RAB6CQ53S08 254 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 PIGZQ86VD9 579 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 SCN4BQ8IWT1 228 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 ARL14EPQ8N8R7 260 aaPredicted RBP13.11□□□□□ -0.31
RUBCN-208ENST00000471364 TSEN2Q8NCE0 465 aaKnown RBP13.11□□□□□ -0.31
RUBCN-208ENST00000471364 SH3RF2Q8TEC5 729 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 USP33Q8TEY7 942 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 ATG4AQ8WYN0 398 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 SLCO2A1Q92959 643 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 FUBP3Q96I24 572 aaKnown RBP eCLIP13.11□□□□□ -0.31
RUBCN-208ENST00000471364 PEBP4Q96S96 227 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 MED10Q9BTT4 135 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 TPSD1Q9BZJ3 242 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 TRIM31Q9BZY9 425 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 RAB6CQ9H0N0 254 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 PCSK1NQ9UHG2 260 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 RALYQ9UKM9 306 aaKnown RBP13.11□□□□□ -0.31
RUBCN-208ENST00000471364 ZMIZ1Q9ULJ6 1067 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 FAM208BQ5VWN6 2430 aa13.11□□□□□ -0.31
RUBCN-208ENST00000471364 ASCC3Q8N3C0 2202 aaKnown RBP13.11□□□□□ -0.31
RUBCN-208ENST00000471364 ADAMTS9Q9P2N4 1935 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 MYO18AQ92614 2054 aaKnown RBP13.1□□□□□ -0.31
RUBCN-208ENST00000471364 C2orf78A6NCI8 922 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 TMEM8BA6NDV4 472 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 BEST1O76090 585 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 HDCP19113 662 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 KDELR1P24390 212 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 CDKN2BP42772 138 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 DRG2P55039 364 aaKnown RBP13.1□□□□□ -0.31
RUBCN-208ENST00000471364 SEC13P55735 322 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 ADCY2Q08462 1091 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 CCNG2Q16589 344 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 TAZQ16635 292 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 SMTNL2Q2TAL5 461 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 C2orf27AQ580R0 203 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 ODF2Q5BJF6 829 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 TFDP3Q5H9I0 405 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 KAZNQ674X7 775 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 ANO7Q6IWH7 933 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 CLEC20AQ6ZU45 233 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 SLC26A9Q7LBE3 791 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 FAM35AQ86V20 835 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 RASSF3Q86WH2 238 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 KDF1Q8NAX2 398 aaPredicted RBP13.1□□□□□ -0.31
RUBCN-208ENST00000471364 MYCBPAPQ8TBZ2 947 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 KCTD13Q8WZ19 329 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 CFAP57Q96MR6 1250 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 PKMYT1Q99640 499 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 LINC00597Q9H2U6 94 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 ACBD3Q9H3P7 528 aa13.1□□□□□ -0.31
RUBCN-208ENST00000471364 KRT82Q9NSB4 513 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms