RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 MAT2AP31153 395 aaKnown RBP12.67□□□□□ -0.38
HDAC3-204ENST00000469207 DRD3P35462 400 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 IRAK1P51617 712 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 ADPRHP54922 357 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 STILQ15468 1287 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 WDTC1Q8N5D0 677 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 OR52K2Q8NGK3 314 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 OR2T34Q8NGX1 318 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 NELFBQ8WX92 580 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 ZNF606Q8WXB4 792 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 SERAC1Q96JX3 654 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 CNDP2Q96KP4 475 aaKnown RBP12.67□□□□□ -0.38
HDAC3-204ENST00000469207 CEP63Q96MT8 703 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 GTPBP4Q9BZE4 634 aaKnown RBP12.67□□□□□ -0.38
HDAC3-204ENST00000469207 IRX2Q9BZI1 471 aaPredicted RBP12.67□□□□□ -0.38
HDAC3-204ENST00000469207 UBE2TQ9NPD8 197 aaPredicted RBP12.67□□□□□ -0.38
HDAC3-204ENST00000469207 ARHGAP20Q9P2F6 1191 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 ADAMTS1Q9UHI8 967 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 CA5BQ9Y2D0 317 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 FASNP49327 2511 aaKnown RBP12.67□□□□□ -0.38
HDAC3-204ENST00000469207 ACACAQ13085 2346 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 ASXL3Q9C0F0 2248 aa12.66□□□□□ -0.38
HDAC3-204ENST00000469207 DOCK9Q9BZ29 2069 aa12.66□□□□□ -0.38
HDAC3-204ENST00000469207 TLR4O00206 839 aa12.66□□□□□ -0.38
HDAC3-204ENST00000469207 PSMA7O14818 248 aa12.66□□□□□ -0.38
HDAC3-204ENST00000469207 GRAP2O75791 330 aa12.66□□□□□ -0.38
HDAC3-204ENST00000469207 LDOC1O95751 146 aaPredicted RBP12.66□□□□□ -0.38
HDAC3-204ENST00000469207 JUPP14923 745 aa12.66□□□□□ -0.38
HDAC3-204ENST00000469207 GOT1P17174 413 aa12.66□□□□□ -0.38
HDAC3-204ENST00000469207 ABCB4P21439 1286 aa12.66□□□□□ -0.38
HDAC3-204ENST00000469207 ITPKBP27987 946 aa12.66□□□□□ -0.38
HDAC3-204ENST00000469207 GGCXP38435 758 aa12.66□□□□□ -0.38
HDAC3-204ENST00000469207 YWHAZP63104 245 aaKnown RBP12.66□□□□□ -0.38
HDAC3-204ENST00000469207 NUCB2P80303 420 aa12.66□□□□□ -0.38
HDAC3-204ENST00000469207 GCNT1Q02742 428 aa12.66□□□□□ -0.38
HDAC3-204ENST00000469207 EIF4EBP2Q13542 120 aaPredicted RBP12.66□□□□□ -0.38
HDAC3-204ENST00000469207 ARID5BQ14865 1188 aa12.66□□□□□ -0.38
HDAC3-204ENST00000469207 SND1Q7KZF4 910 aaKnown RBP eCLIP12.66□□□□□ -0.38
HDAC3-204ENST00000469207 SPATS2Q86XZ4 545 aaKnown RBP12.66□□□□□ -0.38
HDAC3-204ENST00000469207 CCDC117Q8IWD4 279 aaPredicted RBP12.66□□□□□ -0.38
HDAC3-204ENST00000469207 CCAR2Q8N163 923 aaKnown RBP12.66□□□□□ -0.38
HDAC3-204ENST00000469207 PDCD7Q8N8D1 485 aaKnown RBP12.66□□□□□ -0.38
HDAC3-204ENST00000469207 PRMT1Q99873 361 aaKnown RBP12.66□□□□□ -0.38
HDAC3-204ENST00000469207 INTS2Q9H0H0 1204 aaKnown RBP12.66□□□□□ -0.38
HDAC3-204ENST00000469207 DKK4Q9UBT3 224 aa12.66□□□□□ -0.38
HDAC3-204ENST00000469207 CNTN6Q9UQ52 1028 aa12.66□□□□□ -0.38
HDAC3-204ENST00000469207 CTNND2Q9UQB3 1225 aa12.66□□□□□ -0.38
HDAC3-204ENST00000469207 ITIH6Q6UXX5 1313 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 TP53BP1Q12888 1972 aaPredicted RBP12.65□□□□□ -0.38
HDAC3-204ENST00000469207 FAM170AA1A519 330 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 KCNU1A8MYU2 1149 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 RNF103O00237 685 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 THAP12O43422 761 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 MOCS3O95396 460 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 IGLV3-25P01717 112 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 APOEP02649 317 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 C5AR1P21730 350 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 CCR5P51681 352 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 NXPH1P58417 271 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 CENPCQ03188 943 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 TARDBPQ13148 414 aaKnown RBP eCLIP12.65□□□□□ -0.38
HDAC3-204ENST00000469207 NNTQ13423 1086 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 ACCSLQ4AC99 568 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 RNF219Q5W0B1 726 aaPredicted RBP12.65□□□□□ -0.38
HDAC3-204ENST00000469207 FBXL22Q6P050 247 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 C14orf80Q86SX3 495 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 TMEM110Q86TL2 294 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 TRIM59Q8IWR1 403 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 DEFB106AQ8N104 65 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 ZNF557Q8N988 423 aaPredicted RBP12.65□□□□□ -0.38
HDAC3-204ENST00000469207 KDM1BQ8NB78 822 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 FRS2Q8WU20 508 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 ALG14Q96F25 216 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 TIGD1Q96MW7 591 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 CRACR2AQ9BSW2 395 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 SRRTQ9BXP5 876 aaKnown RBP12.65□□□□□ -0.38
HDAC3-204ENST00000469207 POPDC2Q9HBU9 364 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 FZD4Q9ULV1 537 aa12.65□□□□□ -0.38
HDAC3-204ENST00000469207 KNTC1P50748 2209 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 BECN2A8MW95 431 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 F5H5T6 163 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 P4HA2O15460 535 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 TLX3O43711 291 aaPredicted RBP12.64□□□□□ -0.39
HDAC3-204ENST00000469207 BNIP3LO60238 219 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 DFNA5O60443 496 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 SDC3O75056 442 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 AFPP02771 609 aaKnown RBP12.64□□□□□ -0.39
HDAC3-204ENST00000469207 PRB1P04280 392 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 SLC9A1P19634 815 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 EPHA8P29322 1005 aaPredicted RBP12.64□□□□□ -0.39
HDAC3-204ENST00000469207 ACADSBP45954 432 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 SEMG2Q02383 582 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 CETN1Q12798 172 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 CNTN1Q12860 1018 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 STIM1Q13586 685 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 ARHGAP44Q17R89 818 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 CXorf57Q6NSI4 855 aaKnown RBP12.64□□□□□ -0.39
HDAC3-204ENST00000469207 TMPRSS12Q86WS5 348 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 CREBRFQ8IUR6 639 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 PASD1Q8IV76 773 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms