RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 ZCCHC9Q8N567 271 aaKnown RBP17.15■□□□□ 0.34
SDHB-203ENST00000466613 MINDY1Q8N5J2 469 aa17.15■□□□□ 0.34
SDHB-203ENST00000466613 NEK11Q8NG66 645 aa17.15■□□□□ 0.34
SDHB-203ENST00000466613 RPL10LQ96L21 214 aaKnown RBP17.15■□□□□ 0.34
SDHB-203ENST00000466613 PCMTD1Q96MG8 357 aaPredicted RBP17.15■□□□□ 0.34
SDHB-203ENST00000466613 PPP1R9BQ96SB3 815 aa17.15■□□□□ 0.34
SDHB-203ENST00000466613 TBCBQ99426 244 aa17.15■□□□□ 0.34
SDHB-203ENST00000466613 BTBD1Q9H0C5 482 aa17.15■□□□□ 0.34
SDHB-203ENST00000466613 SIK2Q9H0K1 926 aa17.15■□□□□ 0.34
SDHB-203ENST00000466613 HSD3B7Q9H2F3 369 aa17.15■□□□□ 0.34
SDHB-203ENST00000466613 PABPC3Q9H361 631 aaKnown RBP17.15■□□□□ 0.34
SDHB-203ENST00000466613 C6orf106Q9H6K1 298 aaPredicted RBP17.15■□□□□ 0.34
SDHB-203ENST00000466613 ANLNQ9NQW6 1124 aa17.15■□□□□ 0.34
SDHB-203ENST00000466613 TMEM63CQ9P1W3 806 aa17.15■□□□□ 0.34
SDHB-203ENST00000466613 SLCO3A1Q9UIG8 710 aa17.15■□□□□ 0.34
SDHB-203ENST00000466613 TMEM59LQ9UK28 342 aa17.15■□□□□ 0.34
SDHB-203ENST00000466613 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.14■□□□□ 0.33
SDHB-203ENST00000466613 I6L893 689 aaPredicted RBP17.14■□□□□ 0.33
SDHB-203ENST00000466613 OPHN1O60890 802 aa17.14■□□□□ 0.33
SDHB-203ENST00000466613 RNASEH1O60930 286 aaKnown RBP17.14■□□□□ 0.33
SDHB-203ENST00000466613 CLDN11O75508 207 aa17.14■□□□□ 0.33
SDHB-203ENST00000466613 SEMA4FO95754 770 aa17.14■□□□□ 0.33
SDHB-203ENST00000466613 CEACAM1P13688 526 aa17.14■□□□□ 0.33
SDHB-203ENST00000466613 CHRNB2P17787 502 aa17.14■□□□□ 0.33
SDHB-203ENST00000466613 STK19P49842 368 aaPredicted RBP17.14■□□□□ 0.33
SDHB-203ENST00000466613 CDH4P55283 916 aa17.14■□□□□ 0.33
SDHB-203ENST00000466613 UBXN1Q04323 297 aa17.14■□□□□ 0.33
SDHB-203ENST00000466613 TYRO3Q06418 890 aa17.14■□□□□ 0.33
SDHB-203ENST00000466613 ZNF177Q13360 481 aaPredicted RBP17.14■□□□□ 0.33
SDHB-203ENST00000466613 TRNP1Q6NT89 227 aa17.14■□□□□ 0.33
SDHB-203ENST00000466613 TRIM72Q6ZMU5 477 aa17.14■□□□□ 0.33
SDHB-203ENST00000466613 USP30Q70CQ3 517 aa17.14■□□□□ 0.33
SDHB-203ENST00000466613 ARCQ7LC44 396 aa17.14■□□□□ 0.33
SDHB-203ENST00000466613 APTXQ7Z2E3 356 aaKnown RBP17.14■□□□□ 0.33
SDHB-203ENST00000466613 BNIPLQ7Z465 357 aa17.14■□□□□ 0.33
SDHB-203ENST00000466613 HDDC3Q8N4P3 179 aa17.14■□□□□ 0.33
SDHB-203ENST00000466613 ERGIC2Q96RQ1 377 aa17.14■□□□□ 0.33
SDHB-203ENST00000466613 MIR1-1HGQ9H1L0 117 aa17.14■□□□□ 0.33
SDHB-203ENST00000466613 SGK2Q9HBY8 427 aa17.14■□□□□ 0.33
SDHB-203ENST00000466613 EIF2B4Q9UI10 523 aaKnown RBP17.14■□□□□ 0.33
SDHB-203ENST00000466613 GIPC1O14908 333 aa17.13■□□□□ 0.33
SDHB-203ENST00000466613 BCAT2O15382 392 aaPredicted RBP17.13■□□□□ 0.33
SDHB-203ENST00000466613 MMP8P22894 467 aa17.13■□□□□ 0.33
SDHB-203ENST00000466613 PMLP29590 882 aa17.13■□□□□ 0.33
SDHB-203ENST00000466613 NNMTP40261 264 aa17.13■□□□□ 0.33
SDHB-203ENST00000466613 NUMBP49757 651 aa17.13■□□□□ 0.33
SDHB-203ENST00000466613 VASPP50552 380 aaPredicted RBP17.13■□□□□ 0.33
SDHB-203ENST00000466613 SFSWAPQ12872 951 aaKnown RBP17.13■□□□□ 0.33
SDHB-203ENST00000466613 GRIK2Q13002 908 aa17.13■□□□□ 0.33
SDHB-203ENST00000466613 CST6Q15828 149 aa17.13■□□□□ 0.33
SDHB-203ENST00000466613 ACBD5Q5T8D3 534 aaPredicted RBP17.13■□□□□ 0.33
SDHB-203ENST00000466613 MMAAQ8IVH4 418 aaKnown RBP17.13■□□□□ 0.33
SDHB-203ENST00000466613 AOPEPQ8N6M6 819 aa17.13■□□□□ 0.33
SDHB-203ENST00000466613 OR52K2Q8NGK3 314 aa17.13■□□□□ 0.33
SDHB-203ENST00000466613 SNX19Q92543 992 aa17.13■□□□□ 0.33
SDHB-203ENST00000466613 PTPRN2Q92932 1015 aa17.13■□□□□ 0.33
SDHB-203ENST00000466613 ALG14Q96F25 216 aa17.13■□□□□ 0.33
SDHB-203ENST00000466613 ZDHHC5Q9C0B5 715 aa17.13■□□□□ 0.33
SDHB-203ENST00000466613 METTL5Q9NRN9 209 aaKnown RBP17.13■□□□□ 0.33
SDHB-203ENST00000466613 NCKAP1Q9Y2A7 1128 aa17.13■□□□□ 0.33
SDHB-203ENST00000466613 TBC1D30Q9Y2I9 924 aa17.13■□□□□ 0.33
SDHB-203ENST00000466613 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.13■□□□□ 0.33
SDHB-203ENST00000466613 TP53BP1Q12888 1972 aaPredicted RBP17.13■□□□□ 0.33
SDHB-203ENST00000466613 PLXNA2O75051 1894 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 UPK3BL1B0FP48 263 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 UPK3BL2E5RIL1 263 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 MID1O15344 667 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 CNTN5O94779 1100 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 UNGP13051 313 aaPredicted RBP17.12■□□□□ 0.33
SDHB-203ENST00000466613 RDXP35241 583 aaKnown RBP17.12■□□□□ 0.33
SDHB-203ENST00000466613 ZNF252P-AS1Q0IIN9 211 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 SEMA3BQ13214 749 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 ZNF683Q8IZ20 524 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 DEFB124Q8NES8 71 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 OR2I1PQ8NGU4 316 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 C1orf216Q8TAB5 229 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 C1orf74Q96LT6 269 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 CFAP57Q96MR6 1250 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 FAM129BQ96TA1 746 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 C11orf70Q9BRQ4 267 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 FEM1AQ9BSK4 669 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 NAT10Q9H0A0 1025 aaKnown RBP17.12■□□□□ 0.33
SDHB-203ENST00000466613 SLC32A1Q9H598 525 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 DNAAF2Q9NVR5 837 aaKnown RBP17.12■□□□□ 0.33
SDHB-203ENST00000466613 FBXL12Q9NXK8 326 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 SERGEFQ9UGK8 458 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 SLC25A13Q9UJS0 675 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 VPS28Q9UK41 221 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 OR51B4Q9Y5P0 310 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 SNX10Q9Y5X0 201 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 PCNX2A6NKB5 2137 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 TMEM131Q92545 1883 aa17.12■□□□□ 0.33
SDHB-203ENST00000466613 A0A1W2PP55 124 aa17.11■□□□□ 0.33
SDHB-203ENST00000466613 ATP1A3P13637 1013 aa17.11■□□□□ 0.33
SDHB-203ENST00000466613 PSMD8P48556 350 aa17.11■□□□□ 0.33
SDHB-203ENST00000466613 ELAVL3Q14576 367 aaKnown RBP17.11■□□□□ 0.33
SDHB-203ENST00000466613 ANO6Q4KMQ2 910 aa17.11■□□□□ 0.33
SDHB-203ENST00000466613 ALFQ53S48 1182 aa17.11■□□□□ 0.33
SDHB-203ENST00000466613 LRRC31Q6UY01 552 aa17.11■□□□□ 0.33
SDHB-203ENST00000466613 PIP4P1Q86T03 277 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms