RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 APOBEC2Q9Y235 224 aaKnown RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 TNRC6BQ9UPQ9 1833 aaKnown RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 LAMA1P25391 3075 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 UPK3BL1B0FP48 263 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 UPK3BL2E5RIL1 263 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 GIPC1O14908 333 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 MID1O15344 667 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 DFNA5O60443 496 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 MAGEC1O60732 1142 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 SRGAP2O75044 1071 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 GABBR2O75899 941 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 ERBB2P04626 1255 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 C5AR1P21730 350 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 CD27P26842 260 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 PMLP29590 882 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 CLCN1P35523 988 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 STAT1P42224 750 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 CSNK1EP49674 416 aaKnown RBP9.13□□□□□ -0.95
LDB1-203ENST00000461873 CDH4P55283 916 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 POLR2FP61218 127 aaKnown RBP9.13□□□□□ -0.95
LDB1-203ENST00000461873 SHC2P98077 582 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 SEMA3BQ13214 749 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 TRIP6Q15654 476 aaKnown RBP9.13□□□□□ -0.95
LDB1-203ENST00000461873 STX1AQ16623 288 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 ZNF423Q2M1K9 1284 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 HS1BP3Q53T59 392 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 FSCBQ5H9T9 825 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 KIAA0895LQ68EN5 471 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 FBXL22Q6P050 247 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 OLFML1Q6UWY5 402 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 MMS22LQ6ZRQ5 1243 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 PRPF39Q86UA1 669 aaKnown RBP9.13□□□□□ -0.95
LDB1-203ENST00000461873 IRF2BP1Q8IU81 584 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 NAXDQ8IW45 347 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 ATP11CQ8NB49 1132 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 ZNF397Q8NF99 534 aaPredicted RBP9.13□□□□□ -0.95
LDB1-203ENST00000461873 OR2T34Q8NGX1 318 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 OR14C36Q8NHC7 312 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 WFDC5Q8TCV5 224 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 RHBDD1Q8TEB9 315 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 CDC6Q99741 560 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 C6orf106Q9H6K1 298 aaPredicted RBP9.13□□□□□ -0.95
LDB1-203ENST00000461873 CD248Q9HCU0 757 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 TM7SF3Q9NS93 570 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 FAM207AQ9NSI2 230 aaPredicted RBP9.13□□□□□ -0.95
LDB1-203ENST00000461873 SAMSN1Q9NSI8 373 aaKnown RBP9.13□□□□□ -0.95
LDB1-203ENST00000461873 CYTH4Q9UIA0 394 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 XPO7Q9UIA9 1087 aaKnown RBP9.13□□□□□ -0.95
LDB1-203ENST00000461873 FZD4Q9ULV1 537 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 HPCAL4Q9UM19 191 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.13□□□□□ -0.95
LDB1-203ENST00000461873 FHOD1Q9Y613 1164 aa9.13□□□□□ -0.95
LDB1-203ENST00000461873 CNOT1A5YKK6 2376 aaKnown RBP9.12□□□□□ -0.95
LDB1-203ENST00000461873 SPTBN2O15020 2390 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 SPAARA0A1B0GVQ0 90 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 A0A1B0GVT2 93 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 TTC34A8MYJ7 566 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 FLRT2O43155 660 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 SH3BP5O60239 455 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 PAGE1O75459 146 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 GFPT2O94808 682 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 ADCY5O95622 1261 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 IGLV3-25P01717 112 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 PNMA6AP0CW24 399 aaPredicted RBP9.12□□□□□ -0.95
LDB1-203ENST00000461873 GOT1P17174 413 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 OR1E1P30953 314 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 SDC4P31431 198 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 SCNN1AP37088 669 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 ETFBP38117 255 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 NSFP46459 744 aaKnown RBP9.12□□□□□ -0.95
LDB1-203ENST00000461873 GRIA4P48058 902 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 UBXN1Q04323 297 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 HLA-BQ31612 363 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 SLC25A52Q3SY17 297 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 PTPN20Q4JDL3 420 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 FILIP1LQ4L180 1135 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 MIIPQ5JXC2 388 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 NAA35Q5VZE5 725 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 RETSATQ6NUM9 610 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.12□□□□□ -0.95
LDB1-203ENST00000461873 TRIM72Q6ZMU5 477 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 CIR1Q86X95 450 aaPredicted RBP9.12□□□□□ -0.95
LDB1-203ENST00000461873 ZNF354CQ86Y25 554 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 APCDD1Q8J025 514 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 STK40Q8N2I9 435 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 WDTC1Q8N5D0 677 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 OR2I1PQ8NGU4 316 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 CPA5Q8WXQ8 436 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 BIRC7Q96CA5 298 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 P2RY11Q96G91 374 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 PPP1R16AQ96I34 528 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 SPON2Q9BUD6 331 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 SELENOOQ9BVL4 669 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 SIX2Q9NPC8 291 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 NLRC4Q9NPP4 1024 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 SLCO3A1Q9UIG8 710 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 ANKRD6Q9Y2G4 727 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 HS3ST4Q9Y661 456 aa9.12□□□□□ -0.95
LDB1-203ENST00000461873 ASCC3Q8N3C0 2202 aaKnown RBP9.12□□□□□ -0.95
LDB1-203ENST00000461873 GOLGA8CPA6NN73 597 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms