RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 HDAC4P56524 1084 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 DSC1Q08554 894 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 CHI3L2Q15782 390 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 LRRC36Q1X8D7 754 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 CFAP157Q5JU67 520 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 SLC26A9Q7LBE3 791 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 SIX6OS1Q8N1H7 587 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 SEPT8Q92599 483 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 E2F7Q96AV8 911 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 PANX3Q96QZ0 392 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 KCNK4Q9NYG8 393 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 ATP11BQ9Y2G3 1177 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 ARHGAP42A6NI28 874 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 M0QZQ0 153 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 CDH6P55285 790 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 SLC18A2Q05940 514 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 CA9Q16790 459 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 ATG16L1Q676U5 607 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 NET1Q7Z628 596 aaPredicted RBP11.5□□□□□ -0.57
COPS7B-217ENST00000461350 DEFB106AQ8N104 65 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 SPATA18Q8TC71 538 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 SUSD3Q96L08 255 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 UROC1Q96N76 676 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 NR1H4Q96RI1 486 aaPredicted RBP11.5□□□□□ -0.57
COPS7B-217ENST00000461350 TUBGCP5Q96RT8 1024 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 ECSITQ9BQ95 431 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 ULBP1Q9BZM6 244 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 FAM192AQ9GZU8 254 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 TAGLN3Q9UI15 199 aa11.5□□□□□ -0.57
COPS7B-217ENST00000461350 A0A1B0GVG6 124 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.49□□□□□ -0.57
COPS7B-217ENST00000461350 F8W8V4 182 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 PITPNM1O00562 1244 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 KRT37O76014 449 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 ACADSBP45954 432 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 RPL34P49207 117 aaKnown RBP11.49□□□□□ -0.57
COPS7B-217ENST00000461350 SNX16P57768 344 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 LAMB3Q13751 1172 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 DPYSL3Q14195 570 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 DCAF6Q58WW2 860 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 INTS6LQ5JSJ4 861 aaKnown RBP11.49□□□□□ -0.57
COPS7B-217ENST00000461350 DARS2Q6PI48 645 aaKnown RBP11.49□□□□□ -0.57
COPS7B-217ENST00000461350 NUDCD3Q8IVD9 361 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 STKLD1Q8NE28 680 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 TBCBQ99426 244 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 GORASP1Q9BQQ3 440 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 SLC7A8Q9UHI5 535 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 LRFN2Q9ULH4 789 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 LAMA3Q16787 3333 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 MEI4A8MW99 385 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 INPPL1O15357 1258 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 TM7SF2O76062 418 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 CYP11A1P05108 521 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 USP17L7P0C7H9 530 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 YWHAHQ04917 246 aaPredicted RBP11.49□□□□□ -0.57
COPS7B-217ENST00000461350 IFRD2Q12894 506 aaPredicted RBP11.49□□□□□ -0.57
COPS7B-217ENST00000461350 BMPR2Q13873 1038 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 DNAL1Q4LDG9 190 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 TTC39BQ5VTQ0 682 aaPredicted RBP11.49□□□□□ -0.57
COPS7B-217ENST00000461350 SYPL2Q5VXT5 272 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 SLC26A11Q86WA9 606 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 ZDHHC17Q8IUH5 632 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 CRLF3Q8IUI8 442 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 TRIM42Q8IWZ5 723 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 ADAM32Q8TC27 787 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 FAF2Q96CS3 445 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 ACBD6Q9BR61 282 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 NRDE2Q9H7Z3 1164 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 PPM1HQ9ULR3 514 aa11.49□□□□□ -0.57
COPS7B-217ENST00000461350 FAM163BP0C2L3 166 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 ACTR3P61158 418 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 IRX4P78413 519 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 MRPS5P82675 430 aaKnown RBP11.48□□□□□ -0.57
COPS7B-217ENST00000461350 ACAP1Q15027 740 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 PPP6R3Q5H9R7 873 aaPredicted RBP11.48□□□□□ -0.57
COPS7B-217ENST00000461350 CMASQ8NFW8 434 aaPredicted RBP11.48□□□□□ -0.57
COPS7B-217ENST00000461350 PPP1R14CQ8TAE6 165 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 CASD1Q96PB1 797 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 SNRNP25Q9BV90 132 aaKnown RBP11.48□□□□□ -0.57
COPS7B-217ENST00000461350 TMPRSS4Q9NRS4 437 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 YJEFN3A6XGL0 299 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 PRR5-ARHGAP8B1AHC4 643 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 DPYSL4O14531 572 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 OPHN1O60890 802 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 TADA2AO75478 443 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 MAP3K6O95382 1288 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 SNRPAP09012 282 aaKnown RBP11.48□□□□□ -0.57
COPS7B-217ENST00000461350 ARHGAP8P85298 464 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 CDC16Q13042 620 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 NPNTQ6UXI9 565 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.48□□□□□ -0.57
COPS7B-217ENST00000461350 TMCO2Q7Z6W1 182 aaPredicted RBP11.48□□□□□ -0.57
COPS7B-217ENST00000461350 FAM131BQ86XD5 332 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 SMARCD1Q96GM5 515 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 PCMTD2Q9NV79 361 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.48□□□□□ -0.57
COPS7B-217ENST00000461350 CAPN14A8MX76 684 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 H7C0C1 242 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 TSHRP16473 764 aa11.48□□□□□ -0.57
COPS7B-217ENST00000461350 ATP5OP48047 213 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms