RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 SLC25A52Q3SY17 297 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 POM121L1PQ3SYA9 428 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 ACCSLQ4AC99 568 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 ALFQ53S48 1182 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 BRMS1LQ5PSV4 323 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 SH3PXD2AQ5TCZ1 1133 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 PEAR1Q5VY43 1037 aaPredicted RBP9.97□□□□□ -0.81
USP54-207ENST00000451492 CXorf57Q6NSI4 855 aaKnown RBP9.97□□□□□ -0.81
USP54-207ENST00000451492 ZNF677Q86XU0 584 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 STK40Q8N2I9 435 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 MINDY1Q8N5J2 469 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 DEFB124Q8NES8 71 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 JOSD2Q8TAC2 188 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 CEP76Q8TAP6 659 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 NUP58Q9BVL2 599 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 NAT10Q9H0A0 1025 aaKnown RBP9.97□□□□□ -0.81
USP54-207ENST00000451492 ARHGEF38Q9NXL2 777 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 RRN3Q9NYV6 651 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 MPP6Q9NZW5 540 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 SERGEFQ9UGK8 458 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 VPS28Q9UK41 221 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 SLC6A14Q9UN76 642 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 GON4LQ3T8J9 2241 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 DOCK9Q9BZ29 2069 aa9.96□□□□□ -0.81
USP54-207ENST00000451492 EDDM13A0A1B0GTR0 161 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 SYCE3A1L190 88 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 TMCO5BA8MYB1 307 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 E9PAM4 449 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 PLK4O00444 970 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 KCNK5O95279 499 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 SEMA4FO95754 770 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 CYP1A1P04798 512 aaPredicted RBP9.96□□□□□ -0.82
USP54-207ENST00000451492 SRPRAP08240 638 aaKnown RBP9.96□□□□□ -0.82
USP54-207ENST00000451492 ADRB1P08588 477 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 SERPINF2P08697 491 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 GNSP15586 552 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 RDXP35241 583 aaKnown RBP9.96□□□□□ -0.82
USP54-207ENST00000451492 NNMTP40261 264 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 CXCR3P49682 368 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 ZNF252P-AS1Q0IIN9 211 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 CST6Q15828 149 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 N4BP2L1Q5TBK1 243 aaPredicted RBP9.96□□□□□ -0.82
USP54-207ENST00000451492 LRSAM1Q6UWE0 723 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 LAYNQ6UX15 382 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 APTXQ7Z2E3 356 aaKnown RBP9.96□□□□□ -0.82
USP54-207ENST00000451492 RABEPKQ7Z6M1 372 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 METTL3Q86U44 580 aaKnown RBP9.96□□□□□ -0.82
USP54-207ENST00000451492 HDDC3Q8N4P3 179 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 RXFP2Q8WXD0 754 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 ZNF419Q96HQ0 510 aaPredicted RBP9.96□□□□□ -0.82
USP54-207ENST00000451492 PCDHB18PQ96TA0 734 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 OMDQ99983 421 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 SELENOOQ9BVL4 669 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 BTBD1Q9H0C5 482 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 CAPN10Q9HC96 672 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 ADAM22Q9P0K1 906 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 SUSD2Q9UGT4 822 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 TMEM59LQ9UK28 342 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 NCKAP1Q9Y2A7 1128 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 PAXBP1Q9Y5B6 917 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 SLCO1B1Q9Y6L6 691 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 CACNA1AO00555 2505 aa9.96□□□□□ -0.82
USP54-207ENST00000451492 ASCC3Q8N3C0 2202 aaKnown RBP9.95□□□□□ -0.82
USP54-207ENST00000451492 A0A1B0GTW7 788 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 SMTNL1A8MU46 457 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 ARHGAP33O14559 1287 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 ATMINO43313 823 aaPredicted RBP9.95□□□□□ -0.82
USP54-207ENST00000451492 SNAP91O60641 907 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 OPHN1O60890 802 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 CLDN11O75508 207 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 F9P00740 461 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 IL1BP01584 269 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 MMP8P22894 467 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 GLDCP23378 1020 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 SDC4P31431 198 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 HOXD12P35452 270 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 SCNN1AP37088 669 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 ZNF165P49910 485 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 METAP1P53582 386 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 CDH4P55283 916 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 GRIK2Q13002 908 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 SLC12A1Q13621 1099 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 CLEC16AQ2KHT3 1053 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 C9orf64Q5T6V5 341 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 LRRC31Q6UY01 552 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 LINGO4Q6UY18 593 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 Q6ZVU0 165 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 DNAAF5Q86Y56 855 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 DRC7Q8IY82 874 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 PTPRN2Q92932 1015 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 ERGIC2Q96RQ1 377 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 AGPAT1Q99943 283 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 RSPH9Q9H1X1 276 aaPredicted RBP9.95□□□□□ -0.82
USP54-207ENST00000451492 PABPC3Q9H361 631 aaKnown RBP9.95□□□□□ -0.82
USP54-207ENST00000451492 FBRSQ9HAH7 460 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 FBXL12Q9NXK8 326 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 ITIH6Q6UXX5 1313 aa9.95□□□□□ -0.82
USP54-207ENST00000451492 CHD5Q8TDI0 1954 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 A0A1B0GVT2 93 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 LRRC53A6NM62 1247 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms