RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 GGA2Q9UJY4 613 aa14.56□□□□□ -0.08
SREBF1-207ENST00000447641 INTS6Q9UL03 887 aaKnown RBP14.56□□□□□ -0.08
SREBF1-207ENST00000447641 FZD10Q9ULW2 581 aa14.56□□□□□ -0.08
SREBF1-207ENST00000447641 TBC1D30Q9Y2I9 924 aa14.56□□□□□ -0.08
SREBF1-207ENST00000447641 SPAG17Q6Q759 2223 aa14.56□□□□□ -0.08
SREBF1-207ENST00000447641 E9PAM4 449 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 NPC1O15118 1278 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 CLDN11O75508 207 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 KLF8O95600 359 aaPredicted RBP14.55□□□□□ -0.08
SREBF1-207ENST00000447641 H2AFZP0C0S5 128 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 TMEM253P0C7T8 217 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 HOXC13P31276 330 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 TIE1P35590 1138 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 GGCXP38435 758 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 CDH4P55283 916 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 DMWDQ09019 674 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 LMAN2Q12907 356 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 SEMA3BQ13214 749 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 SLC12A1Q13621 1099 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 DMC1Q14565 340 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 TCEAL1Q15170 157 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 ALFQ53S48 1182 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 EGFLAMQ63HQ2 1017 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 CXorf57Q6NSI4 855 aaKnown RBP14.55□□□□□ -0.08
SREBF1-207ENST00000447641 H2AFVQ71UI9 128 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 SLFN11Q7Z7L1 901 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 CIR1Q86X95 450 aaPredicted RBP14.55□□□□□ -0.08
SREBF1-207ENST00000447641 CARNMT1Q8N4J0 409 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 ZNF513Q8N8E2 541 aaPredicted RBP14.55□□□□□ -0.08
SREBF1-207ENST00000447641 TXNDC5Q8NBS9 432 aaKnown RBP14.55□□□□□ -0.08
SREBF1-207ENST00000447641 ACDQ96AP0 544 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 ALG14Q96F25 216 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 RPRD1AQ96P16 312 aaPredicted RBP14.55□□□□□ -0.08
SREBF1-207ENST00000447641 ACOX2Q99424 681 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 NCAPGQ9BPX3 1015 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 NUP85Q9BW27 656 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 FAM126AQ9BYI3 521 aaPredicted RBP14.55□□□□□ -0.08
SREBF1-207ENST00000447641 RETREG1Q9H6L5 497 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 POLR3BQ9NW08 1133 aaPredicted RBP14.55□□□□□ -0.08
SREBF1-207ENST00000447641 KIAA1522Q9P206 1035 aaPredicted RBP14.55□□□□□ -0.08
SREBF1-207ENST00000447641 UVRAGQ9P2Y5 699 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 THAP10Q9P2Z0 257 aaPredicted RBP14.55□□□□□ -0.08
SREBF1-207ENST00000447641 INTUQ9ULD6 942 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 NEU3Q9UQ49 428 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 OR51B4Q9Y5P0 310 aa14.55□□□□□ -0.08
SREBF1-207ENST00000447641 CHD5Q8TDI0 1954 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 FAM72CH0Y354 149 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 H0Y626 953 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 SGK1O00141 431 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 SLC30A4O14863 429 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 GDF9O60383 454 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 LRCH4O75427 683 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 CNTN5O94779 1100 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 NTSR1P30989 418 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 L1CAMP32004 1257 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 PCK1P35558 622 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 OXCT1P55809 520 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 SRSF5Q13243 272 aaKnown RBP14.54□□□□□ -0.08
SREBF1-207ENST00000447641 PIGHQ14442 188 aaPredicted RBP14.54□□□□□ -0.08
SREBF1-207ENST00000447641 E2F5Q15329 346 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 CRY1Q16526 586 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 FUT11Q495W5 492 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 PPM1JQ5JR12 505 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 FAM72AQ5TYM5 149 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 FAM72DQ6L9T8 149 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 TMEM92Q6UXU6 159 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 LRRC31Q6UY01 552 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 TRMT11Q7Z4G4 463 aaKnown RBP14.54□□□□□ -0.08
SREBF1-207ENST00000447641 FAM72BQ86X60 149 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 AHI1Q8N157 1196 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 CCDC33Q8N5R6 958 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 CAMKK1Q8N5S9 505 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 OR52K2Q8NGK3 314 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 PEBP4Q96S96 227 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 GABRG3Q99928 467 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 TSGA10Q9BZW7 698 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 GMEB2Q9UKD1 530 aa14.54□□□□□ -0.08
SREBF1-207ENST00000447641 MUC22E2RYF6 1773 aaPredicted RBP14.54□□□□□ -0.08
SREBF1-207ENST00000447641 CNOT1A5YKK6 2376 aaKnown RBP14.54□□□□□ -0.08
SREBF1-207ENST00000447641 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.53□□□□□ -0.08
SREBF1-207ENST00000447641 CCDC163A0A0D9SF12 145 aa14.53□□□□□ -0.08
SREBF1-207ENST00000447641 A0A1W2PQF6 199 aa14.53□□□□□ -0.08
SREBF1-207ENST00000447641 RNF8O76064 485 aa14.53□□□□□ -0.08
SREBF1-207ENST00000447641 MTA2O94776 668 aa14.53□□□□□ -0.08
SREBF1-207ENST00000447641 DESP17661 470 aa14.53□□□□□ -0.08
SREBF1-207ENST00000447641 MIPP30301 263 aa14.53□□□□□ -0.08
SREBF1-207ENST00000447641 ZNF177Q13360 481 aaPredicted RBP14.53□□□□□ -0.08
SREBF1-207ENST00000447641 CDH18Q13634 790 aa14.53□□□□□ -0.08
SREBF1-207ENST00000447641 PTPRNQ16849 979 aa14.53□□□□□ -0.08
SREBF1-207ENST00000447641 PITRM1Q5JRX3 1037 aa14.53□□□□□ -0.08
SREBF1-207ENST00000447641 EOGTQ5NDL2 527 aa14.53□□□□□ -0.08
SREBF1-207ENST00000447641 MBLAC2Q68D91 279 aa14.53□□□□□ -0.08
SREBF1-207ENST00000447641 LAIR1Q6GTX8 287 aa14.53□□□□□ -0.08
SREBF1-207ENST00000447641 SCYL2Q6P3W7 929 aa14.53□□□□□ -0.08
SREBF1-207ENST00000447641 SETD3Q86TU7 594 aaPredicted RBP14.53□□□□□ -0.08
SREBF1-207ENST00000447641 NLRP14Q86W24 1093 aa14.53□□□□□ -0.08
SREBF1-207ENST00000447641 TMEM139Q8IV31 216 aa14.53□□□□□ -0.08
SREBF1-207ENST00000447641 PSTKQ8IV42 348 aaKnown RBP14.53□□□□□ -0.08
SREBF1-207ENST00000447641 PYROXD2Q8N2H3 581 aa14.53□□□□□ -0.08
SREBF1-207ENST00000447641 SORCS1Q8WY21 1168 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms