RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 FAM124AQ86V42 546 aa19.49■□□□□ 0.71
HMGB3P22-201ENST00000442010 DHX40Q8IX18 779 aaKnown RBP19.49■□□□□ 0.71
HMGB3P22-201ENST00000442010 ANKRD20A12PQ8NF67 263 aa19.49■□□□□ 0.71
HMGB3P22-201ENST00000442010 PTPRN2Q92932 1015 aa19.49■□□□□ 0.71
HMGB3P22-201ENST00000442010 RPL10LQ96L21 214 aaKnown RBP19.49■□□□□ 0.71
HMGB3P22-201ENST00000442010 PCDHB18PQ96TA0 734 aa19.49■□□□□ 0.71
HMGB3P22-201ENST00000442010 TMEM51Q9NW97 253 aa19.49■□□□□ 0.71
HMGB3P22-201ENST00000442010 SUSD2Q9UGT4 822 aa19.49■□□□□ 0.71
HMGB3P22-201ENST00000442010 TBC1D30Q9Y2I9 924 aa19.49■□□□□ 0.71
HMGB3P22-201ENST00000442010 OR51B4Q9Y5P0 310 aa19.49■□□□□ 0.71
HMGB3P22-201ENST00000442010 PLXNA2O75051 1894 aa19.49■□□□□ 0.71
HMGB3P22-201ENST00000442010 EDDM13A0A1B0GTR0 161 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 MEI4A8MW99 385 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 GOLGA8SH3BPF8 625 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 ENDOD1O94919 500 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 DNTTP04053 509 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 CSRP1P21291 193 aaKnown RBP19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 STK19P49842 368 aaPredicted RBP19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 UBXN1Q04323 297 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 DEUP1Q05D60 604 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 SULT2A1Q06520 285 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 AOPEPQ8N6M6 819 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 MSANTD4Q8NCY6 345 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 NEK11Q8NG66 645 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 C1orf74Q96LT6 269 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 CFAP57Q96MR6 1250 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 SPAG5Q96R06 1193 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 FAM129BQ96TA1 746 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 BPIFA3Q9BQP9 254 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 FEM1AQ9BSK4 669 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 SIK2Q9H0K1 926 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 PABPC3Q9H361 631 aaKnown RBP19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 C6orf106Q9H6K1 298 aaPredicted RBP19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 TMPRSS4Q9NRS4 437 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 SCML1Q9UN30 329 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 SNX10Q9Y5X0 201 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 ACACBO00763 2458 aa19.48■□□□□ 0.71
HMGB3P22-201ENST00000442010 A0A1B0GTW7 788 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 DRGXA6NNA5 263 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 C10orf142B7Z368 130 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 GIPC1O14908 333 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 CLDN11O75508 207 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 CNTN5O94779 1100 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 GNSP15586 552 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 CDK11BP21127 795 aaKnown RBP19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 NUMBP49757 651 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 CDH4P55283 916 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 OXCT1P55809 520 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 PTP4A2Q12974 167 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 UAP1L1Q3KQV9 507 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 ANO6Q4KMQ2 910 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 ALFQ53S48 1182 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 SH3PXD2AQ5TCZ1 1133 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 PSAPL1Q6NUJ1 521 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 TRIM72Q6ZMU5 477 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 USP30Q70CQ3 517 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 SND1Q7KZF4 910 aaKnown RBP eCLIP19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 SLC30A5Q8TAD4 765 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 FRS2Q8WU20 508 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 BTBD1Q9H0C5 482 aa19.47■□□□□ 0.71
HMGB3P22-201ENST00000442010 IGLV3-10A0A075B6K4 115 aa19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 UPK3BL1B0FP48 263 aa19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 UPK3BL2E5RIL1 263 aa19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 GJB3O75712 270 aa19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 SEMA4FO95754 770 aa19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 SYPP08247 313 aa19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 PMLP29590 882 aa19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 NOVA1P51513 510 aaKnown RBP19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 GSCP56915 257 aaPredicted RBP19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 SEMA3BQ13214 749 aa19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 ZNF177Q13360 481 aaPredicted RBP19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 CST6Q15828 149 aa19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 TTC31Q49AM3 519 aaPredicted RBP19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 ZCCHC9Q8N567 271 aaKnown RBP19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 MINDY1Q8N5J2 469 aa19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 EMC1Q8N766 993 aa19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 OR2I1PQ8NGU4 316 aa19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 C11orf70Q9BRQ4 267 aa19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 GTPBP2Q9BX10 602 aaKnown RBP19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 SGK2Q9HBY8 427 aa19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 METTL5Q9NRN9 209 aaKnown RBP19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 DNAAF2Q9NVR5 837 aaKnown RBP19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 SERGEFQ9UGK8 458 aa19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 EIF2B4Q9UI10 523 aaKnown RBP19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 PAXBP1Q9Y5B6 917 aa19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 SLCO1B1Q9Y6L6 691 aa19.46■□□□□ 0.71
HMGB3P22-201ENST00000442010 MID1O15344 667 aa19.45■□□□□ 0.7
HMGB3P22-201ENST00000442010 BCAT2O15382 392 aaPredicted RBP19.45■□□□□ 0.7
HMGB3P22-201ENST00000442010 CEACAM1P13688 526 aa19.45■□□□□ 0.7
HMGB3P22-201ENST00000442010 VAV1P15498 845 aa19.45■□□□□ 0.7
HMGB3P22-201ENST00000442010 KCNA4P22459 653 aa19.45■□□□□ 0.7
HMGB3P22-201ENST00000442010 RDXP35241 583 aaKnown RBP19.45■□□□□ 0.7
HMGB3P22-201ENST00000442010 RAB6CQ53S08 254 aa19.45■□□□□ 0.7
HMGB3P22-201ENST00000442010 ACBD5Q5T8D3 534 aaPredicted RBP19.45■□□□□ 0.7
HMGB3P22-201ENST00000442010 RNF219Q5W0B1 726 aaPredicted RBP19.45■□□□□ 0.7
HMGB3P22-201ENST00000442010 PIP4P1Q86T03 277 aa19.45■□□□□ 0.7
HMGB3P22-201ENST00000442010 MMAAQ8IVH4 418 aaKnown RBP19.45■□□□□ 0.7
HMGB3P22-201ENST00000442010 STK40Q8N2I9 435 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms