RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 SFSWAPQ12872 951 aaKnown RBP11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PDCLQ13371 301 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 STIM1Q13586 685 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CCDC40Q4G0X9 1142 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ZC3H12AQ5D1E8 599 aaKnown RBP11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TTC39BQ5VTQ0 682 aaPredicted RBP11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 RAP1GAP2Q684P5 730 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 DENND1BQ6P3S1 775 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 DHRS13Q6UX07 377 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 KANSL1Q7Z3B3 1105 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CHSY1Q86X52 802 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 GATAD2AQ86YP4 633 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 LGI2Q8N0V4 545 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 STK40Q8N2I9 435 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PDCD7Q8N8D1 485 aaKnown RBP11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 EHBP1Q8NDI1 1231 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TSC1Q92574 1164 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ALG14Q96F25 216 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ERVMER34-1Q9H9K5 563 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 POPDC2Q9HBU9 364 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ARHGAP20Q9P2F6 1191 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 A0A1B0GVM2 712 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TCAF2A6NFQ2 919 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 GOLGA8CPA6NN73 597 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 KCNU1A8MYU2 1149 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SLC7A4O43246 635 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 MOCS3O95396 460 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 VAV1P15498 845 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 RXRGP48443 463 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PLK1P53350 603 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 METAP1P53582 386 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CYP4F3Q08477 520 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 KCNH2Q12809 1159 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SLC12A1Q13621 1099 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 MORC3Q14149 939 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SND1Q7KZF4 910 aaKnown RBP eCLIP11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CCAR2Q8N163 923 aaKnown RBP11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 GANCQ8TET4 914 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 NELFBQ8WX92 580 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SKA1Q96BD8 255 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 BBC3Q96PG8 261 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SLC2A13Q96QE2 648 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SPAG5Q96R06 1193 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 OMDQ99983 421 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 INTS2Q9H0H0 1204 aaKnown RBP11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 THAP9Q9H5L6 903 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 GDF3Q9NR23 364 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ST7Q9NRC1 585 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TJP2Q9UDY2 1190 aa11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 HOOK1Q9UJC3 728 aaKnown RBP11.3□□□□□ -0.6
SPTLC1P4-201ENST00000435997 BICDL2A1A5D9 508 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 BECN2A8MW95 431 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 F5H5T6 163 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TLR4O00206 839 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CBX4O00257 560 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ENC1O14682 589 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PLRG1O43660 514 aaKnown RBP11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ATP9BO43861 1147 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 RFPL3O75679 317 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 GNA14O95837 355 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 AFPP02771 609 aaKnown RBP11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 GLI1P08151 1106 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 C1SP09871 688 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CDK4P11802 303 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PDGFRAP16234 1089 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 YWHAZP63104 245 aaKnown RBP11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SULT2A1Q06520 285 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PRAMEF14Q5SWL7 426 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 AGBL4Q5VU57 503 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 NAPEPLDQ6IQ20 393 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 FBXL19Q6PCT2 694 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 IQCHQ86VS3 1027 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TRIM69Q86WT6 500 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CIR1Q86X95 450 aaPredicted RBP11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SPATS2Q86XZ4 545 aaKnown RBP11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CCDC117Q8IWD4 279 aaPredicted RBP11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TMEM145Q8NBT3 493 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 OR52K2Q8NGK3 314 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 OR14C36Q8NHC7 312 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 HNRNPLLQ8WVV9 542 aaKnown RBP11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ZNF606Q8WXB4 792 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SERAC1Q96JX3 654 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CNDP2Q96KP4 475 aaKnown RBP11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 RPL10LQ96L21 214 aaKnown RBP11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 MED15Q96RN5 788 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 KDM4CQ9H3R0 1056 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ACP6Q9NPH0 428 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ASNSD1Q9NWL6 643 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SARDHQ9UL12 918 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CTNND2Q9UQB3 1225 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 OR51B4Q9Y5P0 310 aa11.29□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PLXNA2O75051 1894 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TMEM131Q92545 1883 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PLK4O00444 970 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CAPN9O14815 690 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 MED7O43513 233 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 IL1BP01584 269 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ITGAVP06756 1048 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 KRT5P13647 590 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms