RNA–Protein interactions for RNA: ENST00000433968.5

LMBR1-207, Transcript of limb development membrane protein 1, humanhuman

TSL 4

Gene LMBR1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-207ENST00000433968 ERCC4Q92889 916 aaPredicted RBP21.3■■□□□ 1
LMBR1-207ENST00000433968 ST7Q9NRC1 585 aa21.3■■□□□ 1
LMBR1-207ENST00000433968 TBC1D3DA0A087WVF3 549 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 TBC1D3IA0A087WXS9 549 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 TBC1D3EA0A087X179 549 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 TBC1D3KA0A087X1G2 549 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 TBC1D3FA6NER0 549 aaPredicted RBP21.29■■□□□ 1
LMBR1-207ENST00000433968 TBC1D3LB9A6J9 549 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 CAPN9O14815 690 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 LATO43561 262 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 TBC1D3HP0C7X1 549 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 TACR2P21452 398 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 MZF1P28698 734 aaPredicted RBP21.29■■□□□ 1
LMBR1-207ENST00000433968 STK19P49842 368 aaPredicted RBP21.29■■□□□ 1
LMBR1-207ENST00000433968 NUCB2P80303 420 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 GCNT1Q02742 428 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 CETN1Q12798 172 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 BNIP3Q12983 259 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 ELAVL3Q14576 367 aaKnown RBP21.29■■□□□ 1
LMBR1-207ENST00000433968 SLC45A4Q5BKX6 768 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 ZC3H12AQ5D1E8 599 aaKnown RBP21.29■■□□□ 1
LMBR1-207ENST00000433968 TBC1D3GQ6DHY5 549 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 TBC1D3CQ6IPX1 549 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.29■■□□□ 1
LMBR1-207ENST00000433968 CHSY1Q86X52 802 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 ARHGEF19Q8IW93 802 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 TBC1D3Q8IZP1 549 aaPredicted RBP21.29■■□□□ 1
LMBR1-207ENST00000433968 BTN2A3PQ96KV6 586 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 CEP63Q96MT8 703 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 GTPBP4Q9BZE4 634 aaKnown RBP21.29■■□□□ 1
LMBR1-207ENST00000433968 ERVMER34-1Q9H9K5 563 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 TJP2Q9UDY2 1190 aa21.29■■□□□ 1
LMBR1-207ENST00000433968 ARID1BQ8NFD5 2236 aaPredicted RBP21.29■■□□□ 1
LMBR1-207ENST00000433968 MYLKQ15746 1914 aa21.28■■□□□ 1
LMBR1-207ENST00000433968 P4HA2O15460 535 aa21.28■■□□□ 1
LMBR1-207ENST00000433968 DRD3P35462 400 aa21.28■■□□□ 1
LMBR1-207ENST00000433968 NNMTP40261 264 aa21.28■■□□□ 1
LMBR1-207ENST00000433968 ACADSBP45954 432 aa21.28■■□□□ 1
LMBR1-207ENST00000433968 RXRGP48443 463 aa21.28■■□□□ 1
LMBR1-207ENST00000433968 PPP2CBP62714 309 aa21.28■■□□□ 1
LMBR1-207ENST00000433968 PPP2CAP67775 309 aa21.28■■□□□ 1
LMBR1-207ENST00000433968 TARDBPQ13148 414 aaKnown RBP eCLIP21.28■■□□□ 16e-10■■■□□ 17.6
LMBR1-207ENST00000433968 SLC12A1Q13621 1099 aa21.28■■□□□ 1
LMBR1-207ENST00000433968 CCDC40Q4G0X9 1142 aa21.28■■□□□ 1
LMBR1-207ENST00000433968 SFMBT2Q5VUG0 894 aa21.28■■□□□ 1
LMBR1-207ENST00000433968 NAPEPLDQ6IQ20 393 aa21.28■■□□□ 1
LMBR1-207ENST00000433968 MFSD2AQ8NA29 543 aa21.28■■□□□ 1
LMBR1-207ENST00000433968 PIP4K2CQ8TBX8 421 aa21.28■■□□□ 1
LMBR1-207ENST00000433968 SMARCE1Q969G3 411 aa21.28■■□□□ 1
LMBR1-207ENST00000433968 TRIM62Q9BVG3 475 aa21.28■■□□□ 1
LMBR1-207ENST00000433968 SLC4A5Q9BY07 1137 aa21.28■■□□□ 1
LMBR1-207ENST00000433968 SHROOM3Q8TF72 1996 aa21.27■■□□□ 1
LMBR1-207ENST00000433968 PSMA7O14818 248 aa21.27■■□□□ 1
LMBR1-207ENST00000433968 VAV1P15498 845 aa21.27■■□□□ 1
LMBR1-207ENST00000433968 ITPKBP27987 946 aa21.27■■□□□ 1
LMBR1-207ENST00000433968 EIF2S3P41091 472 aaKnown RBP21.27■■□□□ 1
LMBR1-207ENST00000433968 NUMBP49757 651 aa21.27■■□□□ 1
LMBR1-207ENST00000433968 SEMG2Q02383 582 aa21.27■■□□□ 1
LMBR1-207ENST00000433968 HES3Q5TGS1 186 aa21.27■■□□□ 1
LMBR1-207ENST00000433968 FBXL19Q6PCT2 694 aa21.27■■□□□ 1
LMBR1-207ENST00000433968 KANSL1Q7Z3B3 1105 aa21.27■■□□□ 1
LMBR1-207ENST00000433968 SPATS2Q86XZ4 545 aaKnown RBP21.27■■□□□ 1
LMBR1-207ENST00000433968 OXR1Q8N573 874 aa21.27■■□□□ 1
LMBR1-207ENST00000433968 EHBP1Q8NDI1 1231 aa21.27■■□□□ 1
LMBR1-207ENST00000433968 STK32AQ8WU08 396 aa21.27■■□□□ 1
LMBR1-207ENST00000433968 FRS2Q8WU20 508 aa21.27■■□□□ 1
LMBR1-207ENST00000433968 FAM131CQ96AQ9 280 aa21.27■■□□□ 1
LMBR1-207ENST00000433968 DHTKD1Q96HY7 919 aaPredicted RBP21.27■■□□□ 1
LMBR1-207ENST00000433968 KREMEN1Q96MU8 473 aa21.27■■□□□ 1
LMBR1-207ENST00000433968 NRSN2Q9GZP1 204 aa21.27■■□□□ 1
LMBR1-207ENST00000433968 ARHGAP20Q9P2F6 1191 aa21.27■■□□□ 1
LMBR1-207ENST00000433968 AK5Q9Y6K8 562 aa21.27■■□□□ 1
LMBR1-207ENST00000433968 F5H5T6 163 aa21.26■□□□□ 0.99
LMBR1-207ENST00000433968 TLX3O43711 291 aaPredicted RBP21.26■□□□□ 0.99
LMBR1-207ENST00000433968 TRUB2O95900 331 aaKnown RBP21.26■□□□□ 0.99
LMBR1-207ENST00000433968 IGLV3-25P01717 112 aa21.26■□□□□ 0.99
LMBR1-207ENST00000433968 PDGFRAP16234 1089 aa21.26■□□□□ 0.99
LMBR1-207ENST00000433968 PLK1P53350 603 aa21.26■□□□□ 0.99
LMBR1-207ENST00000433968 METAP1P53582 386 aa21.26■□□□□ 0.99
LMBR1-207ENST00000433968 YWHAZP63104 245 aaKnown RBP21.26■□□□□ 0.99
LMBR1-207ENST00000433968 SULT2A1Q06520 285 aa21.26■□□□□ 0.99
LMBR1-207ENST00000433968 STIM1Q13586 685 aa21.26■□□□□ 0.99
LMBR1-207ENST00000433968 RTP5Q14D33 572 aa21.26■□□□□ 0.99
LMBR1-207ENST00000433968 DENND1BQ6P3S1 775 aa21.26■□□□□ 0.99
LMBR1-207ENST00000433968 PRPF39Q86UA1 669 aaKnown RBP21.26■□□□□ 0.99
LMBR1-207ENST00000433968 CCAR2Q8N163 923 aaKnown RBP21.26■□□□□ 0.99
LMBR1-207ENST00000433968 SPAG5Q96R06 1193 aa21.26■□□□□ 0.99
LMBR1-207ENST00000433968 UBL7Q96S82 380 aaPredicted RBP21.26■□□□□ 0.99
LMBR1-207ENST00000433968 KDM4CQ9H3R0 1056 aa21.26■□□□□ 0.99
LMBR1-207ENST00000433968 POPDC2Q9HBU9 364 aa21.26■□□□□ 0.99
LMBR1-207ENST00000433968 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.26■□□□□ 0.99
LMBR1-207ENST00000433968 CYTH4Q9UIA0 394 aa21.26■□□□□ 0.99
LMBR1-207ENST00000433968 CNTN6Q9UQ52 1028 aa21.26■□□□□ 0.99
LMBR1-207ENST00000433968 HELZ2Q9BYK8 2649 aaKnown RBP21.25■□□□□ 0.99
LMBR1-207ENST00000433968 DOCK9Q9BZ29 2069 aa21.25■□□□□ 0.99
LMBR1-207ENST00000433968 KCNU1A8MYU2 1149 aa21.25■□□□□ 0.99
LMBR1-207ENST00000433968 SLC7A4O43246 635 aa21.25■□□□□ 0.99
LMBR1-207ENST00000433968 RTN2O75298 545 aa21.25■□□□□ 0.99
LMBR1-207ENST00000433968 CD44P16070 742 aaKnown RBP21.25■□□□□ 0.99
LMBR1-207ENST00000433968 CKMT2P17540 419 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms