RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 IGHV4-34P06331 123 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 SLC2A3P11169 496 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 JUPP14923 745 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 PFKFB1P16118 471 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 EIF2S3P41091 472 aaKnown RBP8.59□□□□□ -1.03
CDH13-203ENST00000431540 ACADSBP45954 432 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 DAOAP59103 153 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 KRT85P78386 507 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 LRRC63Q05C16 580 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 CYP4F3Q08477 520 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 CUL2Q13617 745 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 TTC39BQ5VTQ0 682 aaPredicted RBP8.59□□□□□ -1.03
CDH13-203ENST00000431540 KRBA2Q6ZNG9 492 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 DSG4Q86SJ6 1040 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 ZSCAN30Q86W11 494 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 MDM1Q8TC05 714 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 BHMTQ93088 406 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 IFT43Q96FT9 208 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 MYO19Q96H55 970 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 SERPINB11Q96P15 392 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 ARID3AQ99856 593 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 ULBP1Q9BZM6 244 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 USP29Q9HBJ7 922 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 GDF3Q9NR23 364 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 FBXL12Q9NXK8 326 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 RAXQ9Y2V3 346 aa8.59□□□□□ -1.03
CDH13-203ENST00000431540 CXorf51AA0A1B0GTR3 108 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 A0A1B0GVL5 298 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 A0A1W2PR77 199 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 YJEFN3A6XGL0 299 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 E7ENQ6 273 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 TLR4O00206 839 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 O00370 1275 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 ENC1O14682 589 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 ATXN7O15265 892 aaPredicted RBP8.58□□□□□ -1.04
CDH13-203ENST00000431540 KALRNO60229 2985 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 RFPL3O75679 317 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 FSBPO95073 299 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 LTFP02788 710 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 ITGAVP06756 1048 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 HSP90AA1P07900 732 aaKnown RBP8.58□□□□□ -1.04
CDH13-203ENST00000431540 HMBSP08397 361 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 CKMT2P17540 419 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 ABCB4P21439 1286 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 ACP1P24666 158 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 ABCG1P45844 678 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 UCNP55089 124 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 SKOR1P84550 965 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 ECT2LQ008S8 904 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 GCNT1Q02742 428 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 ELAVL3Q14576 367 aaKnown RBP8.58□□□□□ -1.04
CDH13-203ENST00000431540 CST6Q15828 149 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 ZNF394Q53GI3 561 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 C9orf64Q5T6V5 341 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 FAM46CQ5VWP2 391 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 PRPF39Q86UA1 669 aaKnown RBP8.58□□□□□ -1.04
CDH13-203ENST00000431540 DCP2Q8IU60 420 aaKnown RBP8.58□□□□□ -1.04
CDH13-203ENST00000431540 MFN1Q8IWA4 741 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 UBR7Q8N806 425 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 HNRNPLLQ8WVV9 542 aaKnown RBP8.58□□□□□ -1.04
CDH13-203ENST00000431540 SEMA4DQ92854 862 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 FGF11Q92914 225 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 SLC39A13Q96H72 371 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 SPATA32Q96LK8 384 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 TSG101Q99816 390 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 OMDQ99983 421 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 PRORYQ9H606 182 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDH13-203ENST00000431540 SLC12A6Q9UHW9 1150 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDH13-203ENST00000431540 CNTN6Q9UQ52 1028 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 ERVW-1Q9UQF0 538 aa8.58□□□□□ -1.04
CDH13-203ENST00000431540 DNMT3AQ9Y6K1 912 aaPredicted RBP8.58□□□□□ -1.04
CDH13-203ENST00000431540 FLNBO75369 2602 aaKnown RBP8.57□□□□□ -1.04
CDH13-203ENST00000431540 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.57□□□□□ -1.04
CDH13-203ENST00000431540 LZTS3O60299 673 aaPredicted RBP8.57□□□□□ -1.04
CDH13-203ENST00000431540 TBL1XO60907 577 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 ZNF202O95125 648 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 LUC7L3O95232 432 aaKnown RBP8.57□□□□□ -1.04
CDH13-203ENST00000431540 GP1BAP07359 652 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 GLI1P08151 1106 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 TRIM49P0CI25 452 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 TRIM49CP0CI26 452 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 SLC8A1P32418 973 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 ACTN2P35609 894 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 MMP16P51512 607 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 TBX4P57082 545 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 SNX16P57768 344 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 DNM1Q05193 864 aaKnown RBP8.57□□□□□ -1.04
CDH13-203ENST00000431540 ADIGQ0VDE8 80 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 ZNF211Q13398 564 aaPredicted RBP8.57□□□□□ -1.04
CDH13-203ENST00000431540 EIF4EBP2Q13542 120 aaPredicted RBP8.57□□□□□ -1.04
CDH13-203ENST00000431540 FAM133BQ5BKY9 247 aaKnown RBP8.57□□□□□ -1.04
CDH13-203ENST00000431540 MS4A13Q5J8X5 152 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 ZNF658Q5TYW1 1059 aaPredicted RBP8.57□□□□□ -1.04
CDH13-203ENST00000431540 SFMBT2Q5VUG0 894 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 NAPEPLDQ6IQ20 393 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 FBXL19Q6PCT2 694 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 C19orf48Q6RUI8 117 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 IGF2-ASQ6U949 168 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms