RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 KCNT2Q6UVM3 1135 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 PACS1Q6VY07 963 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 ZNF534Q76KX8 674 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 DPH6Q7L8W6 267 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 EEPD1Q7L9B9 569 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 TRIM50Q86XT4 487 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 ULK2Q8IYT8 1036 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 KIRREL3Q8IZU9 778 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 CRYBG2Q8N1P7 616 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 RBM15BQ8NDT2 890 aaKnown RBP8.92□□□□□ -0.98
GABPB1-205ENST00000429662 NPLOC4Q8TAT6 608 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 OLFM3Q96PB7 478 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 CSPG4P5Q96PW8 444 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 PPP1R12CQ9BZL4 782 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 BRD8Q9H0E9 1235 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 DHX35Q9H5Z1 703 aaKnown RBP8.92□□□□□ -0.98
GABPB1-205ENST00000429662 PLAC1Q9HBJ0 212 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 VTA1Q9NP79 307 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 ARHGEF4Q9NR80 690 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 SMYD2Q9NRG4 433 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 NDE1Q9NXR1 346 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.92□□□□□ -0.98
GABPB1-205ENST00000429662 TXNDC16Q9P2K2 825 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 AP4E1Q9UPM8 1137 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 AKT3Q9Y243 479 aa8.92□□□□□ -0.98
GABPB1-205ENST00000429662 PTPRSQ13332 1948 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 RBM47A0AV96 593 aaKnown RBP8.91□□□□□ -0.98
GABPB1-205ENST00000429662 DPPA5A6NC42 116 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 ERI2A8K979 691 aaKnown RBP8.91□□□□□ -0.98
GABPB1-205ENST00000429662 TMEM114B3SHH9 223 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 CLGNO14967 610 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 SLC22A2O15244 555 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 NCAM2O15394 837 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 PAPSS1O43252 624 aaPredicted RBP8.91□□□□□ -0.98
GABPB1-205ENST00000429662 MTSS1O43312 755 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 CCNT2O60583 730 aaKnown RBP8.91□□□□□ -0.98
GABPB1-205ENST00000429662 TSPAN1O60635 241 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 PLIN3O60664 434 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 PIAS1O75925 651 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 LGALS2P05162 132 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 MPOP05164 745 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 APOA4P06727 396 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 POLBP06746 335 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 IQCF3P0C7M6 154 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 SP100P23497 879 aaPredicted RBP8.91□□□□□ -0.98
GABPB1-205ENST00000429662 ACAT1P24752 427 aaKnown RBP8.91□□□□□ -0.98
GABPB1-205ENST00000429662 CRABP2P29373 138 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 GP5P40197 560 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 RGS2P41220 211 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 HARS2P49590 506 aaKnown RBP8.91□□□□□ -0.98
GABPB1-205ENST00000429662 RGS7P49802 495 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 COPAP53621 1224 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 SESN3P58005 492 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 DSG1Q02413 1049 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 DEUP1Q05D60 604 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 MAP2K5Q13163 448 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 RCN2Q14257 317 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 PPP6R3Q5H9R7 873 aaPredicted RBP8.91□□□□□ -0.98
GABPB1-205ENST00000429662 MROH9Q5TGP6 573 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 C1orf146Q5VVC0 180 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 MBLAC2Q68D91 279 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 LCA5Q86VQ0 697 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 TTC30AQ86WT1 665 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 TREML1Q86YW5 311 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 ADGRF2Q8IZF7 708 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 PPTC7Q8NI37 304 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 ZFAND2BQ8WV99 257 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 WDR60Q8WVS4 1066 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 PPP2R3CQ969Q6 453 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 ISL2Q96A47 359 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 FGD4Q96M96 766 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 TSC22D3Q99576 134 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 CPNE1Q99829 537 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 SH3GL3Q99963 347 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 THTPAQ9BU02 230 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 XPNPEP3Q9NQH7 507 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 ZDHHC7Q9NXF8 308 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 IGSF9Q9P2J2 1179 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 PRKAG2Q9UGJ0 569 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 BCAP29Q9UHQ4 241 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 YBX2Q9Y2T7 364 aaKnown RBP8.91□□□□□ -0.98
GABPB1-205ENST00000429662 ASB3Q9Y575 518 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 CDY2AQ9Y6F7 541 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 CDY1Q9Y6F8 540 aa8.91□□□□□ -0.98
GABPB1-205ENST00000429662 HMX2A2RU54 273 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 RRN3P2A6NIE6 340 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 KPNA7A9QM74 516 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 PSMD3O43242 534 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 DAB1O75553 588 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 GRAP2O75791 330 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 SNUPNO95149 360 aaKnown RBP8.9□□□□□ -0.98
GABPB1-205ENST00000429662 PDHA1P08559 390 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 CYP2C9P11712 490 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 AXLP30530 894 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 ADSLP30566 484 aaPredicted RBP8.9□□□□□ -0.98
GABPB1-205ENST00000429662 SPRP35270 261 aaPredicted RBP8.9□□□□□ -0.98
GABPB1-205ENST00000429662 MATKP42679 507 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 SERPINB8P50452 374 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 NRLP54845 237 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 ALDH18A1P54886 795 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms