RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 TMEM63CQ9P1W3 806 aa22.19■■□□□ 1.14
CDCP1-202ENST00000425231 A0A1B0GTW7 788 aa22.18■■□□□ 1.14
CDCP1-202ENST00000425231 SYPP08247 313 aa22.18■■□□□ 1.14
CDCP1-202ENST00000425231 CEACAM1P13688 526 aa22.18■■□□□ 1.14
CDCP1-202ENST00000425231 STK19P49842 368 aaPredicted RBP22.18■■□□□ 1.14
CDCP1-202ENST00000425231 OXCT1P55809 520 aa22.18■■□□□ 1.14
CDCP1-202ENST00000425231 DEUP1Q05D60 604 aa22.18■■□□□ 1.14
CDCP1-202ENST00000425231 SEMA3BQ13214 749 aa22.18■■□□□ 1.14
CDCP1-202ENST00000425231 ARCQ7LC44 396 aa22.18■■□□□ 1.14
CDCP1-202ENST00000425231 MINDY1Q8N5J2 469 aa22.18■■□□□ 1.14
CDCP1-202ENST00000425231 MSANTD4Q8NCY6 345 aa22.18■■□□□ 1.14
CDCP1-202ENST00000425231 ANKRD20A12PQ8NF67 263 aa22.18■■□□□ 1.14
CDCP1-202ENST00000425231 OR2I1PQ8NGU4 316 aa22.18■■□□□ 1.14
CDCP1-202ENST00000425231 FAM129BQ96TA1 746 aa22.18■■□□□ 1.14
CDCP1-202ENST00000425231 BTBD1Q9H0C5 482 aa22.18■■□□□ 1.14
CDCP1-202ENST00000425231 EIF2B4Q9UI10 523 aaKnown RBP22.18■■□□□ 1.14
CDCP1-202ENST00000425231 SCML1Q9UN30 329 aa22.18■■□□□ 1.14
CDCP1-202ENST00000425231 OR51B4Q9Y5P0 310 aa22.18■■□□□ 1.14
CDCP1-202ENST00000425231 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.17■■□□□ 1.14
CDCP1-202ENST00000425231 EDDM13A0A1B0GTR0 161 aa22.17■■□□□ 1.14
CDCP1-202ENST00000425231 GOLGA8SH3BPF8 625 aa22.17■■□□□ 1.14
CDCP1-202ENST00000425231 MMP8P22894 467 aa22.17■■□□□ 1.14
CDCP1-202ENST00000425231 PMLP29590 882 aa22.17■■□□□ 1.14
CDCP1-202ENST00000425231 STAT1P42224 750 aa22.17■■□□□ 1.14
CDCP1-202ENST00000425231 TYRO3Q06418 890 aa22.17■■□□□ 1.14
CDCP1-202ENST00000425231 SULT2A1Q06520 285 aa22.17■■□□□ 1.14
CDCP1-202ENST00000425231 ZNF177Q13360 481 aaPredicted RBP22.17■■□□□ 1.14
CDCP1-202ENST00000425231 ARTNQ5T4W7 220 aa22.17■■□□□ 1.14
CDCP1-202ENST00000425231 RNF219Q5W0B1 726 aaPredicted RBP22.17■■□□□ 1.14
CDCP1-202ENST00000425231 USP30Q70CQ3 517 aa22.17■■□□□ 1.14
CDCP1-202ENST00000425231 SND1Q7KZF4 910 aaKnown RBP eCLIP22.17■■□□□ 1.14
CDCP1-202ENST00000425231 ZCCHC9Q8N567 271 aaKnown RBP22.17■■□□□ 1.14
CDCP1-202ENST00000425231 SPAG5Q96R06 1193 aa22.17■■□□□ 1.14
CDCP1-202ENST00000425231 ERGIC2Q96RQ1 377 aa22.17■■□□□ 1.14
CDCP1-202ENST00000425231 FEM1AQ9BSK4 669 aa22.17■■□□□ 1.14
CDCP1-202ENST00000425231 MIR1-1HGQ9H1L0 117 aa22.17■■□□□ 1.14
CDCP1-202ENST00000425231 PABPC3Q9H361 631 aaKnown RBP22.17■■□□□ 1.14
CDCP1-202ENST00000425231 TMPRSS4Q9NRS4 437 aa22.17■■□□□ 1.14
CDCP1-202ENST00000425231 DNAAF2Q9NVR5 837 aaKnown RBP22.17■■□□□ 1.14
CDCP1-202ENST00000425231 TMEM51Q9NW97 253 aa22.17■■□□□ 1.14
CDCP1-202ENST00000425231 TBC1D30Q9Y2I9 924 aa22.17■■□□□ 1.14
CDCP1-202ENST00000425231 SNX10Q9Y5X0 201 aa22.17■■□□□ 1.14
CDCP1-202ENST00000425231 UPK3BL1B0FP48 263 aa22.16■■□□□ 1.14
CDCP1-202ENST00000425231 UPK3BL2E5RIL1 263 aa22.16■■□□□ 1.14
CDCP1-202ENST00000425231 CLDN11O75508 207 aa22.16■■□□□ 1.14
CDCP1-202ENST00000425231 SEMA4FO95754 770 aa22.16■■□□□ 1.14
CDCP1-202ENST00000425231 CDK11BP21127 795 aaKnown RBP22.16■■□□□ 1.14
CDCP1-202ENST00000425231 CDH4P55283 916 aa22.16■■□□□ 1.14
CDCP1-202ENST00000425231 UBXN1Q04323 297 aa22.16■■□□□ 1.14
CDCP1-202ENST00000425231 CST6Q15828 149 aa22.16■■□□□ 1.14
CDCP1-202ENST00000425231 TTC31Q49AM3 519 aaPredicted RBP22.16■■□□□ 1.14
CDCP1-202ENST00000425231 NEK11Q8NG66 645 aa22.16■■□□□ 1.14
CDCP1-202ENST00000425231 C1orf74Q96LT6 269 aa22.16■■□□□ 1.14
CDCP1-202ENST00000425231 CFAP57Q96MR6 1250 aa22.16■■□□□ 1.14
CDCP1-202ENST00000425231 SGK2Q9HBY8 427 aa22.16■■□□□ 1.14
CDCP1-202ENST00000425231 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.16■■□□□ 1.14
CDCP1-202ENST00000425231 DRGXA6NNA5 263 aa22.15■■□□□ 1.14
CDCP1-202ENST00000425231 BCAT2O15382 392 aaPredicted RBP22.15■■□□□ 1.14
CDCP1-202ENST00000425231 RNASEH1O60930 286 aaKnown RBP22.15■■□□□ 1.14
CDCP1-202ENST00000425231 GJB3O75712 270 aa22.15■■□□□ 1.14
CDCP1-202ENST00000425231 CNTN5O94779 1100 aa22.15■■□□□ 1.14
CDCP1-202ENST00000425231 UNGP13051 313 aaPredicted RBP22.15■■□□□ 1.14
CDCP1-202ENST00000425231 NNMTP40261 264 aa22.15■■□□□ 1.14
CDCP1-202ENST00000425231 VASPP50552 380 aaPredicted RBP22.15■■□□□ 1.14
CDCP1-202ENST00000425231 ALFQ53S48 1182 aa22.15■■□□□ 1.14
CDCP1-202ENST00000425231 PIP4P1Q86T03 277 aa22.15■■□□□ 1.14
CDCP1-202ENST00000425231 MMAAQ8IVH4 418 aaKnown RBP22.15■■□□□ 1.14
CDCP1-202ENST00000425231 DEFB124Q8NES8 71 aa22.15■■□□□ 1.14
CDCP1-202ENST00000425231 SLC30A5Q8TAD4 765 aa22.15■■□□□ 1.14
CDCP1-202ENST00000425231 FRS2Q8WU20 508 aa22.15■■□□□ 1.14
CDCP1-202ENST00000425231 BIRC7Q96CA5 298 aa22.15■■□□□ 1.14
CDCP1-202ENST00000425231 PCMTD1Q96MG8 357 aaPredicted RBP22.15■■□□□ 1.14
CDCP1-202ENST00000425231 PPP1R9BQ96SB3 815 aa22.15■■□□□ 1.14
CDCP1-202ENST00000425231 PCDHB18PQ96TA0 734 aa22.15■■□□□ 1.14
CDCP1-202ENST00000425231 FBXL12Q9NXK8 326 aa22.15■■□□□ 1.14
CDCP1-202ENST00000425231 SERGEFQ9UGK8 458 aa22.15■■□□□ 1.14
CDCP1-202ENST00000425231 PAXBP1Q9Y5B6 917 aa22.15■■□□□ 1.14
CDCP1-202ENST00000425231 SLCO1B1Q9Y6L6 691 aa22.15■■□□□ 1.14
CDCP1-202ENST00000425231 PCNX2A6NKB5 2137 aa22.15■■□□□ 1.14
CDCP1-202ENST00000425231 MID1O15344 667 aa22.14■■□□□ 1.14
CDCP1-202ENST00000425231 OPHN1O60890 802 aa22.14■■□□□ 1.14
CDCP1-202ENST00000425231 ENDOD1O94919 500 aa22.14■■□□□ 1.14
CDCP1-202ENST00000425231 ATP1A3P13637 1013 aa22.14■■□□□ 1.14
CDCP1-202ENST00000425231 VAV1P15498 845 aa22.14■■□□□ 1.14
CDCP1-202ENST00000425231 PTP4A2Q12974 167 aa22.14■■□□□ 1.14
CDCP1-202ENST00000425231 GRIK2Q13002 908 aa22.14■■□□□ 1.14
CDCP1-202ENST00000425231 TRIM72Q6ZMU5 477 aa22.14■■□□□ 1.14
CDCP1-202ENST00000425231 STK40Q8N2I9 435 aa22.14■■□□□ 1.14
CDCP1-202ENST00000425231 HDDC3Q8N4P3 179 aa22.14■■□□□ 1.14
CDCP1-202ENST00000425231 AOPEPQ8N6M6 819 aa22.14■■□□□ 1.14
CDCP1-202ENST00000425231 EMC1Q8N766 993 aa22.14■■□□□ 1.14
CDCP1-202ENST00000425231 CNTNAP3BQ96NU0 1288 aa22.14■■□□□ 1.14
CDCP1-202ENST00000425231 CNTNAP3Q9BZ76 1288 aa22.14■■□□□ 1.14
CDCP1-202ENST00000425231 ZDHHC5Q9C0B5 715 aa22.14■■□□□ 1.14
CDCP1-202ENST00000425231 METTL5Q9NRN9 209 aaKnown RBP22.14■■□□□ 1.14
CDCP1-202ENST00000425231 NCKAP1Q9Y2A7 1128 aa22.14■■□□□ 1.14
CDCP1-202ENST00000425231 NYNRINQ9P2P1 1898 aaKnown RBP22.14■■□□□ 1.13
CDCP1-202ENST00000425231 IGLV3-10A0A075B6K4 115 aa22.14■■□□□ 1.13
CDCP1-202ENST00000425231 CD59P13987 128 aa22.14■■□□□ 1.13
CDCP1-202ENST00000425231 SLC8A1P32418 973 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms