RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 FAM131BQ86XD5 332 aa18.37■□□□□ 0.53
SBDSP1-202ENST00000423945 CCDC117Q8IWD4 279 aaPredicted RBP18.37■□□□□ 0.53
SBDSP1-202ENST00000423945 KDM1BQ8NB78 822 aa18.37■□□□□ 0.53
SBDSP1-202ENST00000423945 RPL10LQ96L21 214 aaKnown RBP18.37■□□□□ 0.53
SBDSP1-202ENST00000423945 C1orf74Q96LT6 269 aa18.37■□□□□ 0.53
SBDSP1-202ENST00000423945 HSPA12BQ96MM6 686 aa18.37■□□□□ 0.53
SBDSP1-202ENST00000423945 ADAM22Q9P0K1 906 aa18.37■□□□□ 0.53
SBDSP1-202ENST00000423945 SUN2Q9UH99 717 aa18.37■□□□□ 0.53
SBDSP1-202ENST00000423945 EVLQ9UI08 416 aaPredicted RBP18.37■□□□□ 0.53
SBDSP1-202ENST00000423945 MYO6Q9UM54 1294 aa18.37■□□□□ 0.53
SBDSP1-202ENST00000423945 TBC1D30Q9Y2I9 924 aa18.37■□□□□ 0.53
SBDSP1-202ENST00000423945 IGLV3-10A0A075B6K4 115 aa18.36■□□□□ 0.53
SBDSP1-202ENST00000423945 LRRC53A6NM62 1247 aa18.36■□□□□ 0.53
SBDSP1-202ENST00000423945 KHNYNO15037 678 aaKnown RBP18.36■□□□□ 0.53
SBDSP1-202ENST00000423945 MOCS3O95396 460 aa18.36■□□□□ 0.53
SBDSP1-202ENST00000423945 RFC1P35251 1148 aaPredicted RBP18.36■□□□□ 0.53
SBDSP1-202ENST00000423945 C9orf64Q5T6V5 341 aa18.36■□□□□ 0.53
SBDSP1-202ENST00000423945 SND1Q7KZF4 910 aaKnown RBP eCLIP18.36■□□□□ 0.53
SBDSP1-202ENST00000423945 FEM1AQ9BSK4 669 aa18.36■□□□□ 0.53
SBDSP1-202ENST00000423945 EDEM2Q9BV94 578 aa18.36■□□□□ 0.53
SBDSP1-202ENST00000423945 GPR174Q9BXC1 333 aa18.36■□□□□ 0.53
SBDSP1-202ENST00000423945 MAGEB5Q9BZ81 275 aa18.36■□□□□ 0.53
SBDSP1-202ENST00000423945 RSPH9Q9H1X1 276 aaPredicted RBP18.36■□□□□ 0.53
SBDSP1-202ENST00000423945 TAS2R14Q9NYV8 317 aa18.36■□□□□ 0.53
SBDSP1-202ENST00000423945 ZNF212Q9UDV6 495 aa18.36■□□□□ 0.53
SBDSP1-202ENST00000423945 MED19A0JLT2 244 aaPredicted RBP18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 CDX4O14627 284 aaPredicted RBP18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 CLDN11O75508 207 aa18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 PBX1P40424 430 aa18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 PTPN9P43378 593 aa18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 CDH4P55283 916 aa18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 ST8SIA6P61647 398 aa18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 ZSCAN23Q3MJ62 389 aa18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 FILIP1LQ4L180 1135 aa18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 TRIM61Q5EBN2 209 aa18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 SLC23A3Q6PIS1 610 aa18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 C3orf20Q8ND61 904 aa18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 CENPIQ92674 756 aaPredicted RBP18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 PTPRN2Q92932 1015 aa18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 HAPLN3Q96S86 360 aa18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 PSMB7Q99436 277 aa18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 FBRSQ9HAH7 460 aa18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 FSCN3Q9NQT6 498 aa18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 SEPT11Q9NVA2 429 aaKnown RBP18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 MPP6Q9NZW5 540 aa18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 CNOT1A5YKK6 2376 aaKnown RBP18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 CACNA1EQ15878 2313 aa18.35■□□□□ 0.53
SBDSP1-202ENST00000423945 CHD5Q8TDI0 1954 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 E9PAM4 449 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 NDUFS2O75306 463 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 CALB1P05937 261 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 ACADMP11310 421 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 KRT3P12035 628 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 VAV1P15498 845 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 MAOBP27338 520 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 SDC4P31431 198 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 ACSL1P33121 698 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 HDAC4P56524 1084 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 FANCCQ00597 558 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 C1QBPQ07021 282 aaKnown RBP18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 ZNF177Q13360 481 aaPredicted RBP18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 CDO1Q16878 200 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 PPP1R15BQ5SWA1 713 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 ACAD10Q6JQN1 1059 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 WDR59Q6PJI9 974 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 FAM124AQ86V42 546 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 FRS2Q8WU20 508 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 FAM129BQ96TA1 746 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 CAPN10Q9HC96 672 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 TMEM51Q9NW97 253 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 PAXBP1Q9Y5B6 917 aa18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 ASCC3Q8N3C0 2202 aaKnown RBP18.34■□□□□ 0.53
SBDSP1-202ENST00000423945 TARSL2A2RTX5 802 aaKnown RBP18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 SIGLEC16A6NMB1 481 aa18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 SERPINC1P01008 464 aa18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 OXTRP30559 389 aa18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 HOXD12P35452 270 aa18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 VASPP50552 380 aaPredicted RBP18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 OXCT1P55809 520 aa18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 ZBTB16Q05516 673 aa18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 MANEALQ5VSG8 457 aa18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 RNF219Q5W0B1 726 aaPredicted RBP18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 ZNF776Q68DI1 518 aaPredicted RBP18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 STRADAQ7RTN6 431 aa18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 ZNF571Q7Z3V5 609 aaPredicted RBP18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 DNAAF5Q86Y56 855 aa18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 MCOLN2Q8IZK6 566 aa18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 DNASE2BQ8WZ79 361 aa18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 NUP58Q9BVL2 599 aa18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 SELENOOQ9BVL4 669 aa18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 AIPL1Q9NZN9 384 aa18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 SERGEFQ9UGK8 458 aa18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 NEU3Q9UQ49 428 aa18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 NCOR2Q9Y618 2525 aa18.33■□□□□ 0.52
SBDSP1-202ENST00000423945 A0A0D9SEW6 157 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 EDDM13A0A1B0GTR0 161 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 C4orf47A7E2U8 309 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 METTL12A8MUP2 240 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 FAM72CH0Y354 149 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms