RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 C1orf127Q8N9H9 656 aa17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 SMYD1Q8NB12 490 aa17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 ANKRD36BP1Q96IX9 119 aa17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 HAUS8Q9BT25 410 aa17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 RPAP3Q9H6T3 665 aaPredicted RBP17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 SH3GLB1Q9Y371 365 aa17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 MATN2O00339 956 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 H6PDO95479 791 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 NFICP08651 508 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 PGAM1P18669 254 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 FUT4P22083 530 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 FSTL1Q12841 308 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 C16orf72Q14CZ0 275 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 CCDC153Q494R4 210 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 HEATR6Q6AI08 1181 aaKnown RBP17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 ITPRIPL1Q6GPH6 555 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 XRRA1Q6P2D8 792 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 ELMSAN1Q6PJG2 1045 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 C12orf29Q8N999 325 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 ACVR1CQ8NER5 493 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 NSUN6Q8TEA1 469 aaKnown RBP17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 LRTOMTQ8WZ04 291 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 RANBP9Q96S59 729 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 SLC29A1Q99808 456 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 ZNF670Q9BS34 389 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 PCDHAC1Q9H158 963 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 OLAHQ9NV23 265 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 FAIMQ9NVQ4 179 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 EBF1Q9UH73 591 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 VPS28Q9UK41 221 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 FZD1Q9UP38 647 aa17.02■□□□□ 0.32
NPC1L1-203ENST00000423141 B4GALT5O43286 388 aa17.02■□□□□ 0.31
NPC1L1-203ENST00000423141 VAPBO95292 243 aa17.02■□□□□ 0.31
NPC1L1-203ENST00000423141 PPARGP37231 505 aaPredicted RBP17.02■□□□□ 0.31
NPC1L1-203ENST00000423141 CTBSQ01459 385 aa17.02■□□□□ 0.31
NPC1L1-203ENST00000423141 ART3Q13508 389 aa17.02■□□□□ 0.31
NPC1L1-203ENST00000423141 ADRM1Q16186 407 aa17.02■□□□□ 0.31
NPC1L1-203ENST00000423141 NXNQ6DKJ4 435 aa17.02■□□□□ 0.31
NPC1L1-203ENST00000423141 LRRC43Q8N309 656 aa17.02■□□□□ 0.31
NPC1L1-203ENST00000423141 ZBTB8BQ8NAP8 495 aaPredicted RBP17.02■□□□□ 0.31
NPC1L1-203ENST00000423141 LPAR1Q92633 364 aa17.02■□□□□ 0.31
NPC1L1-203ENST00000423141 FCRL3Q96P31 734 aaPredicted RBP17.02■□□□□ 0.31
NPC1L1-203ENST00000423141 QKIQ96PU8 341 aaKnown RBP eCLIP17.02■□□□□ 0.31
NPC1L1-203ENST00000423141 AGAP2Q99490 1192 aa17.02■□□□□ 0.31
NPC1L1-203ENST00000423141 TMEM79Q9BSE2 394 aa17.02■□□□□ 0.31
NPC1L1-203ENST00000423141 PRDM16Q9HAZ2 1276 aa17.02■□□□□ 0.31
NPC1L1-203ENST00000423141 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.02■□□□□ 0.31
NPC1L1-203ENST00000423141 TRIP11Q15643 1979 aa17.02■□□□□ 0.31
NPC1L1-203ENST00000423141 SPATA31C2B4DYI2 1134 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 PRKCBP05771 671 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 MMP10P09238 476 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 CCDC130P13994 396 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 GP5P40197 560 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 CLCN2P51788 898 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 IKBKEQ14164 716 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 SNRNP48Q6IEG0 339 aaKnown RBP17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 Q6ZNX1 250 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 CARM1Q86X55 608 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 COLGALT1Q8NBJ5 622 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 DLG3Q92796 817 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 DCUN1D5Q9BTE7 237 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 DTLQ9NZJ0 730 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 PCNTO95613 3336 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 H3BNH8 94 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 TRIM13O60858 407 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 ITGB3P05106 788 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 PFKMP08237 780 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 TXNL4AP83876 142 aaKnown RBP17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 SEL1L3Q68CR1 1132 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 FSTL4Q6MZW2 842 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 SCUBE3Q8IX30 993 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 PPP1R14BQ96C90 147 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 ZNF597Q96LX8 424 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 AGAP3Q96P47 875 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 ILKAPQ9H0C8 392 aaPredicted RBP17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 ANLNQ9NQW6 1124 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 C20orf96Q9NUD7 363 aaPredicted RBP17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 TSPAN16Q9UKR8 245 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 BPTFQ12830 3046 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 CROCCQ5TZA2 2017 aa17.01■□□□□ 0.31
NPC1L1-203ENST00000423141 A0A096LPK6 155 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 SH3PXD2BA1X283 911 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 HDAC3O15379 428 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 GRID2O43424 1007 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 SDC4P31431 198 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 NAA20P61599 178 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 MTX3Q5HYI7 312 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 EEF1DP3Q658K8 133 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 STRA8Q7Z7C7 330 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 PATL1Q86TB9 770 aaKnown RBP17■□□□□ 0.31
NPC1L1-203ENST00000423141 RNF149Q8NC42 400 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 HTR3CQ8WXA8 447 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 KHSRPQ92945 711 aaKnown RBP eCLIP17■□□□□ 0.31
NPC1L1-203ENST00000423141 CERS2Q96G23 380 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 PCYT2Q99447 389 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 B3GNT5Q9BYG0 378 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 ZNF385DQ9H6B1 395 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 ADA2Q9NZK5 511 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 MORF4L1Q9UBU8 362 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 ZDHHC2Q9UIJ5 367 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms