RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 UBXN10Q96LJ8 280 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 ADAD1Q96M93 576 aaKnown RBP4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 COG8Q96MW5 612 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 PPP1R10Q96QC0 940 aaKnown RBP4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 TMEM79Q9BSE2 394 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 TUBB6Q9BUF5 446 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 HDHD5Q9BXW7 423 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 NOD2Q9HC29 1040 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 SAGE1Q9NXZ1 904 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 AGO2Q9UKV8 859 aaKnown RBP4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 TNFSF13BQ9Y275 285 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 RRP7AQ9Y3A4 280 aaKnown RBP4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 COL3A1P02461 1466 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 ZMYM2Q9UBW7 1377 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 TRBV5-3A0A0A0MS03 114 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 KIR2DS5A0A0G2JLQ3 304 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 DNAJC9-AS1A6NH13 148 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 STX16-NPEPL1H3BU86 382 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 KIR2DS3K7RE56 304 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 STX16O14662 325 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 PRPF4O43172 522 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 TLX3O43711 291 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 METTL18O95568 372 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 TOP3BO95985 862 aaKnown RBP4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 LCKP06239 509 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 ARSAP15289 507 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 RXRAP19793 462 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 HOXD9P28356 352 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 AVPR2P30518 371 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 RPS6KA3P51812 740 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 MVDP53602 400 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 ZNF91Q05481 1191 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 ANKRD1Q15327 319 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 Q4G0T1 1027 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 GXYLT1Q4G148 440 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 MIDNQ504T8 468 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 MAP3K21Q5TCX8 1036 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 DENND1BQ6P3S1 775 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 MTFR2Q6P444 385 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 SYNE3Q6ZMZ3 975 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 BBS12Q6ZW61 710 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 LRRTM4Q86VH4 590 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 KLBQ86Z14 1044 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 CPOQ8IVL8 374 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 PRSS3P2Q8NHM4 247 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 C16orf52Q8NHV5 167 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 MASTLQ96GX5 879 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 SCNM1Q9BWG6 230 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 C1QTNF7Q9BXJ2 289 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 CLPBQ9H078 707 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 RMI1Q9H9A7 625 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 THAP1Q9NVV9 213 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 TMEM248Q9NWD8 314 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 TUBA8Q9NY65 449 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 ZNF70Q9UC06 446 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 KLQ9UEF7 1012 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 CD207Q9UJ71 328 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 GJD2Q9UKL4 321 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 ABCC9O60706 1549 aa4.2□□□□□ -1.74
HMGB1P11-201ENST00000413899 CCNT1O60563 726 aaKnown RBP4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 TSPAN3O60637 253 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 UGDHO60701 494 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 HLA-DQA2P01906 255 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 CKMT1AP12532 417 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 LYL1P12980 280 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 PLK5Q496M5 336 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 SLC30A9Q6PML9 568 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 ZNF793Q6ZN11 406 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 C1QL2Q7Z5L3 287 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 PIP4P1Q86T03 277 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 ANKRD13BQ86YJ7 626 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 ADGRF4Q8IZF3 695 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 LINS1Q8NG48 757 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 IP6K1Q92551 441 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 USP13Q92995 863 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 WDR83Q9BRX9 315 aaKnown RBP4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 TRIM31Q9BZY9 425 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 Q9N2J8 555 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 RIC8AQ9NPQ8 531 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 TMEM184CQ9NVA4 438 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 ARL15Q9NXU5 204 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 PGAP2Q9UHJ9 254 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 SLC25A13Q9UJS0 675 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 SLC8A2Q9UPR5 921 aa4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 TTBK1Q5TCY1 1321 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P11-201ENST00000413899 A0A0G2JK05 382 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 WDR91A4D1P6 747 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 VWA3AA6NCI4 1184 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 TMEM247A6NEH6 219 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 ADAM10O14672 748 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 NCAM2O15394 837 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 MSI1O43347 362 aaKnown RBP4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 NEURL1O76050 574 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 NFATC1O95644 943 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 FGBP02675 491 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 CYP4B1P13584 511 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 TYK2P29597 1187 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms