RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 STYK1Q6J9G0 422 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 TTI2Q6NXR4 508 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 HERC6Q8IVU3 1022 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 TTC5Q8N0Z6 440 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 ANKRD35Q8N283 1001 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 LRRC57Q8N9N7 239 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 BAP1Q92560 729 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 PIK3R3Q92569 461 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 MTBPQ96DY7 904 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 THAP11Q96EK4 314 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 JPH4Q96JJ6 628 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 FMO2Q99518 471 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 TMEM168Q9H0V1 697 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 TMEM245Q9H330 911 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 DIABLOQ9NR28 239 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 SPATA6Q9NWH7 488 aaPredicted RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 NDE1Q9NXR1 346 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 PARP2Q9UGN5 583 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 EIF2B4Q9UI10 523 aaKnown RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 SLC24A2Q9UI40 661 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 EIF3LQ9Y262 564 aaKnown RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 TMX2Q9Y320 296 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 ADAMTS13Q76LX8 1427 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 A0A0G2JPF8 293 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 OR6C74A6NCV1 312 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 C16orf96A6NNT2 1141 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 PRR5-ARHGAP8B1AHC4 643 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 HNRNPCL3B7ZW38 293 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 PGRMC1O00264 195 aaKnown RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 BUB1O43683 1085 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 HNRNPCL4P0DMR1 293 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 ZNF23P17027 643 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 TAC1P20366 129 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 SOX9P48436 509 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 MAN2A2P49641 1150 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 ANTXR2P58335 489 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 YWHAGP61981 247 aaKnown RBP eCLIP5.34□□□□□ -1.55
HERC4-205ENST00000412272 CDR2Q01850 454 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 SNAPC2Q13487 334 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 THOC5Q13769 683 aaKnown RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 GALNT3Q14435 633 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 MMEL1Q495T6 779 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 FAM83BQ5T0W9 1011 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.34□□□□□ -1.55
HERC4-205ENST00000412272 KLHL7Q8IXQ5 586 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 ZNF527Q8NB42 609 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 ICA1LQ8NDH6 482 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 OR52H1Q8NGJ2 320 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 GRPEL2Q8TAA5 225 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 RAB3IL1Q8TBN0 382 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 AGR3Q8TD06 166 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 CHAC2Q8WUX2 184 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 YIPF5Q969M3 257 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 TRAF4Q9BUZ4 470 aaPredicted RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 TRIM39Q9HCM9 518 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 COA4Q9NYJ1 87 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 KCND2Q9NZV8 630 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 EIF3KQ9UBQ5 218 aaKnown RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 PCDHGC3Q9UN70 934 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.34□□□□□ -1.55
HERC4-205ENST00000412272 CHTOPQ9Y3Y2 248 aaKnown RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 CSNK1G3Q9Y6M4 447 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 HEG1Q9ULI3 1381 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 ZNF142P52746 1687 aaPredicted RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 KIF1AQ12756 1690 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 RNF103O00237 685 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 SYN3O14994 580 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 GOT2P00505 430 aaKnown RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 EPOP01588 193 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 APOA4P06727 396 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 C8BP07358 591 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 HSPD1P10809 573 aaKnown RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 PDGFRAP16234 1089 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 NCF2P19878 526 aaPredicted RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 CD247P20963 164 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 OXTRP30559 389 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 HOXA1P49639 335 aaPredicted RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 PTENP60484 403 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 KCNAB2Q13303 367 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 TMEM65Q6PI78 240 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 ZDHHC24Q6UX98 284 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 RNF111Q6ZNA4 994 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 RFX8Q6ZV50 586 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 TRMT10CQ7L0Y3 403 aaKnown RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 KRT74Q7RTS7 529 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 GSTA5Q7RTV2 222 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 SGMS1Q86VZ5 419 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 MCOLN3Q8TDD5 553 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 DDX1Q92499 740 aaKnown RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 CNDP2Q96KP4 475 aaKnown RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 LRRC37BQ96QE4 947 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 GDF15Q99988 308 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 AZI2Q9H6S1 392 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 LRRC19Q9H756 370 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 POLR3BQ9NW08 1133 aaPredicted RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 CUEDC1Q9NWM3 386 aaPredicted RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 EBF1Q9UH73 591 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 APPL1Q9UKG1 709 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 PPM1HQ9ULR3 514 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 SLC6A14Q9UN76 642 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms