RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 C8orf48Q96LL4 319 aa9.25□□□□□ -0.93
PSEN1-205ENST00000406768 CRAMP1Q96RY5 1269 aa9.25□□□□□ -0.93
PSEN1-205ENST00000406768 CCDC106Q9BWC9 280 aa9.25□□□□□ -0.93
PSEN1-205ENST00000406768 RTFDC1Q9BY42 306 aaPredicted RBP9.25□□□□□ -0.93
PSEN1-205ENST00000406768 TASP1Q9H6P5 420 aa9.25□□□□□ -0.93
PSEN1-205ENST00000406768 RPF2Q9H7B2 306 aaKnown RBP9.25□□□□□ -0.93
PSEN1-205ENST00000406768 ZNF304Q9HCX3 659 aa9.25□□□□□ -0.93
PSEN1-205ENST00000406768 WDR70Q9NW82 654 aa9.25□□□□□ -0.93
PSEN1-205ENST00000406768 PCDHB2Q9Y5E7 798 aa9.25□□□□□ -0.93
PSEN1-205ENST00000406768 XIRP1Q702N8 1843 aaKnown RBP9.24□□□□□ -0.93
PSEN1-205ENST00000406768 C12orf71A8MTZ7 269 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 EIF3DO15371 548 aaKnown RBP eCLIP9.24□□□□□ -0.93
PSEN1-205ENST00000406768 RFPL2O75678 378 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 RGS20O76081 388 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 IFNA16P05015 189 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 CYP1A2P05177 515 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 SSTR3P32745 418 aaPredicted RBP9.24□□□□□ -0.93
PSEN1-205ENST00000406768 HPCAL1P37235 193 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 TMBIM6P55061 237 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 SCRN3Q0VDG4 424 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 FUT2Q10981 343 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 MERTKQ12866 999 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 COG2Q14746 738 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 PCSK7Q16549 785 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 CYP51A1Q16850 503 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 VWA5B1Q5TIE3 1220 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 PPP4R4Q6NUP7 873 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 MFSD7Q6UXD7 560 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 KIAA0408Q6ZU52 694 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 BRSK2Q8IWQ3 736 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 Q8N9G6 341 aaPredicted RBP9.24□□□□□ -0.93
PSEN1-205ENST00000406768 TBC1D15Q8TC07 691 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 SERAC1Q96JX3 654 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 DHX35Q9H5Z1 703 aaKnown RBP9.24□□□□□ -0.93
PSEN1-205ENST00000406768 XPNPEP1Q9NQW7 623 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 AGPAT3Q9NRZ7 376 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 UBA2Q9UBT2 640 aaPredicted RBP9.24□□□□□ -0.93
PSEN1-205ENST00000406768 NXF1Q9UBU9 619 aaKnown RBP9.24□□□□□ -0.93
PSEN1-205ENST00000406768 FETUBQ9UGM5 382 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 PCDHGC3Q9UN70 934 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 MAGED2Q9UNF1 606 aaPredicted RBP9.24□□□□□ -0.93
PSEN1-205ENST00000406768 DISP2A7MBM2 1401 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 MRASO14807 208 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 ATE1O95260 518 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 HLA-DOAP06340 250 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 NPTX2P47972 431 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 BCAR1P56945 870 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 SESN2P58004 480 aaPredicted RBP9.24□□□□□ -0.93
PSEN1-205ENST00000406768 SLC18A2Q05940 514 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 PPIL2Q13356 520 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 DLGAP5Q15398 846 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 MGAT5BQ3V5L5 792 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 CBWD6Q4V339 395 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 TMEM119Q4V9L6 283 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 CBWD3Q5JTY5 395 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 CBWD5Q5RIA9 395 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.24□□□□□ -0.93
PSEN1-205ENST00000406768 FAXCQ5TGI0 409 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 FKBP9P1Q75LS8 142 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 STK32CQ86UX6 486 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 RAB43Q86YS6 212 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 UBR7Q8N806 425 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 FAM156AQ8NDB6 213 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 QKIQ96PU8 341 aaKnown RBP eCLIP9.24□□□□□ -0.93
PSEN1-205ENST00000406768 CLEC4MQ9H2X3 399 aaPredicted RBP9.24□□□□□ -0.93
PSEN1-205ENST00000406768 KCTD10Q9H3F6 313 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 ZNF395Q9H8N7 513 aaPredicted RBP9.24□□□□□ -0.93
PSEN1-205ENST00000406768 C17orf75Q9HAS0 396 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 HSPBP1Q9NZL4 362 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 EMC3Q9P0I2 261 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 DRG1Q9Y295 367 aaKnown RBP9.24□□□□□ -0.93
PSEN1-205ENST00000406768 NFAT5O94916 1531 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 MYH13Q9UKX3 1938 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 B8ZZF3 427 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 PDPK1O15530 556 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 PRPSAP2O60256 369 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 H2AFYO75367 372 aaKnown RBP9.24□□□□□ -0.93
PSEN1-205ENST00000406768 JAM2P57087 298 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 TTC23Q5W5X9 447 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 UNC45BQ8IWX7 931 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 KATNAL2Q8IYT4 538 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 NKX2-3Q8TAU0 364 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 EPS8L1Q8TE68 723 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 FAR1Q8WVX9 515 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 MCEEQ96PE7 176 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 YME1L1Q96TA2 773 aa9.24□□□□□ -0.93
PSEN1-205ENST00000406768 KCTD14Q9BQ13 255 aaPredicted RBP9.24□□□□□ -0.93
PSEN1-205ENST00000406768 TRMT13Q9NUP7 481 aaKnown RBP9.24□□□□□ -0.93
PSEN1-205ENST00000406768 PNMA6FA0A0J9YX94 578 aa9.23□□□□□ -0.93
PSEN1-205ENST00000406768 PRR23AA6NEV1 266 aa9.23□□□□□ -0.93
PSEN1-205ENST00000406768 I3L521 148 aa9.23□□□□□ -0.93
PSEN1-205ENST00000406768 INO80B-WBP1J3KQ70 363 aa9.23□□□□□ -0.93
PSEN1-205ENST00000406768 TRIM13O60858 407 aa9.23□□□□□ -0.93
PSEN1-205ENST00000406768 FOSP01100 380 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-205ENST00000406768 SPRP35270 261 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-205ENST00000406768 SNX16P57768 344 aa9.23□□□□□ -0.93
PSEN1-205ENST00000406768 PLIN5Q00G26 463 aa9.23□□□□□ -0.93
PSEN1-205ENST00000406768 IL5RAQ01344 420 aa9.23□□□□□ -0.93
PSEN1-205ENST00000406768 PIGHQ14442 188 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-205ENST00000406768 FAM102BQ5T8I3 360 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms