RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 CDY2AQ9Y6F7 541 aa18.79■□□□□ 0.6
CHRFAM7A-202ENST00000397827 BIRC5O15392 142 aa18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 POLBP06746 335 aa18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 GNAZP19086 355 aa18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 POLE2P56282 527 aa18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 RCN2Q14257 317 aa18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 PAN2Q504Q3 1202 aaKnown RBP18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 FBXO27Q8NI29 283 aa18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 CERS2Q96G23 380 aa18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 RILPQ96NA2 401 aa18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 APOL2Q9BQE5 337 aa18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 ZNF358Q9NW07 568 aa18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 TXNDC16Q9P2K2 825 aa18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 SF3B1O75533 1304 aaKnown RBP eCLIP18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 ZSCAN9O15535 394 aaPredicted RBP18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 ZBTB24O43167 697 aaPredicted RBP18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 SCNN1BP51168 640 aa18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 ALDH18A1P54886 795 aaKnown RBP18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 KYAT3Q6YP21 454 aaKnown RBP18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 CMC1Q7Z7K0 106 aa18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 KATNAL1Q9BW62 490 aa18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 SUDS3Q9H7L9 328 aaPredicted RBP18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 FBXW11Q9UKB1 542 aa18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 SHROOM3Q8TF72 1996 aa18.78■□□□□ 0.6
CHRFAM7A-202ENST00000397827 THP07101 528 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 C6orf222P0C671 652 aaPredicted RBP18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 ABCG1P45844 678 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 SCNN1GP51170 649 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 SEMA3BQ13214 749 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 MBLAC2Q68D91 279 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 CCNJLQ8IV13 435 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 DNAAF3Q8N9W5 541 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 AZIN2Q96A70 460 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 WWP1Q9H0M0 922 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 PRDM16Q9HAZ2 1276 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 THAP1Q9NVV9 213 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 GLRA3O75311 464 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 LTFP02788 710 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 TYK2P29597 1187 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 ATG14Q6ZNE5 492 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 ZNF669Q96BR6 464 aaPredicted RBP18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 PLEKHG4BQ96PX9 1271 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 SLC9A7Q96T83 725 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 COLEC11Q9BWP8 271 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 TMEM216Q9P0N5 145 aa18.77■□□□□ 0.6
CHRFAM7A-202ENST00000397827 CAPN14A8MX76 684 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 PLIN3O60664 434 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 FBXO21O94952 628 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 FGF3P11487 239 aaPredicted RBP18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 KDSRQ06136 332 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ZBTB17Q13105 803 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 KPNB1Q14974 876 aaKnown RBP18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 SMC1BQ8NDV3 1235 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ATP2A3Q93084 1043 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 NTAN1Q96AB6 310 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ZNF778Q96MU6 729 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 AGAP2Q99490 1192 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 NAT9Q9BTE0 207 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 CNGB3Q9NQW8 809 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 UBP1Q9NZI7 540 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ASB3Q9Y575 518 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 PCDHGA4Q9Y5G9 962 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 B2RBV5 119 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ATP9BO43861 1147 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 PRKCGP05129 697 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 CD68P34810 354 aaPredicted RBP18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 LHX1P48742 406 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 FKBP1BP68106 108 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 MRPS6P82932 125 aaKnown RBP18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 PCLAFQ15004 111 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 C10orf107Q8IVU9 208 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 RAB3IL1Q8TBN0 382 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ACMSDQ8TDX5 336 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 WDR60Q8WVS4 1066 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 TKTL2Q9H0I9 626 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 SLC38A7Q9NVC3 462 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 VANGL2Q9ULK5 521 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 DNAJC16Q9Y2G8 782 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ARL5CA6NH57 179 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 TPP2P29144 1249 aaPredicted RBP18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 HOXC8P31273 242 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 UBAP2LQ14157 1087 aaKnown RBP18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 RAB41Q5JT25 222 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 CERCAMQ5T4B2 595 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 RBM12BQ8IXT5 1001 aaKnown RBP18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 MFSD3Q96ES6 412 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 CELF6Q96J87 481 aaKnown RBP18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 WDCPQ9H6R7 721 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 OR12D3Q9UGF7 316 aa18.76■□□□□ 0.59
CHRFAM7A-202ENST00000397827 HHLA1C9JL84 531 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 M0QZ92 97 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 AP2A1O95782 977 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 SLC1A6P48664 564 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 SESN3P58005 492 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 PPIDQ08752 370 aaKnown RBP18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 SCAPQ12770 1279 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 TAF1CQ15572 869 aaPredicted RBP18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 TIGD5Q53EQ6 642 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ACSBG2Q5FVE4 666 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms