RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 NHLH1Q02575 133 aa21.78■■□□□ 1.08
TSPAN4-206ENST00000397408 ENPP2Q13822 863 aa21.78■■□□□ 1.08
TSPAN4-206ENST00000397408 PTPRNQ16849 979 aa21.78■■□□□ 1.08
TSPAN4-206ENST00000397408 C6orf118Q5T5N4 469 aa21.78■■□□□ 1.08
TSPAN4-206ENST00000397408 ERMARDQ5T6L9 678 aa21.78■■□□□ 1.08
TSPAN4-206ENST00000397408 RNF219Q5W0B1 726 aaPredicted RBP21.78■■□□□ 1.08
TSPAN4-206ENST00000397408 ANO7Q6IWH7 933 aa21.78■■□□□ 1.08
TSPAN4-206ENST00000397408 SETD3Q86TU7 594 aaPredicted RBP21.78■■□□□ 1.08
TSPAN4-206ENST00000397408 MUC3BQ9H195 1237 aa21.78■■□□□ 1.08
TSPAN4-206ENST00000397408 DHX35Q9H5Z1 703 aaKnown RBP21.78■■□□□ 1.08
TSPAN4-206ENST00000397408 VPS28Q9UK41 221 aa21.78■■□□□ 1.08
TSPAN4-206ENST00000397408 INTUQ9ULD6 942 aa21.78■■□□□ 1.08
TSPAN4-206ENST00000397408 PCDHGA2Q9Y5H1 932 aa21.78■■□□□ 1.08
TSPAN4-206ENST00000397408 R4GN57 208 aa21.78■■□□□ 1.08
TSPAN4-206ENST00000397408 A0A1W2PQF6 199 aa21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 TCRBV21S2A2A0A5A6 115 aa21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 TCF4P15884 667 aa21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 RHOQP17081 205 aa21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 IL1R2P27930 398 aa21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 EPHB2P29323 1055 aa21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 CTSOP43234 321 aaPredicted RBP21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 MAGEA1P43355 309 aa21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 PLK1P53350 603 aa21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 SEMA3BQ13214 749 aa21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 SPA17Q15506 151 aa21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 CA9Q16790 459 aa21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 KIAA1211LQ6NV74 962 aa21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 ZC3H14Q6PJT7 736 aaKnown RBP21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 SLC35G2Q8TBE7 412 aa21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 RFFLQ8WZ73 363 aa21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 ALG14Q96F25 216 aa21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 BAG1Q99933 345 aaPredicted RBP21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 FEM1AQ9BSK4 669 aa21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 GRPEL1Q9HAV7 217 aa21.77■■□□□ 1.08
TSPAN4-206ENST00000397408 FANCMQ8IYD8 2048 aa21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 GOLGA6L3A6NEY3 463 aa21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 EIF3CLB5ME19 914 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 ALDH1A2O94788 518 aa21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 NDUFA10O95299 355 aa21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 HLA-EP13747 358 aa21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 STARD3Q14849 445 aa21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 SMTNL2Q2TAL5 461 aa21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 NLRP14Q86W24 1093 aa21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 LONP2Q86WA8 852 aa21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 RHOT2Q8IXI1 618 aa21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 ZBTB44Q8NCP5 570 aa21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 MDGA1Q8NFP4 955 aa21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 HMGB4Q8WW32 186 aa21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 ATRIPQ8WXE1 791 aa21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 PPP1R9BQ96SB3 815 aa21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 EIF3CQ99613 913 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 ZWILCHQ9H900 591 aa21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 TMEM248Q9NWD8 314 aa21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 OR51B4Q9Y5P0 310 aa21.76■■□□□ 1.07
TSPAN4-206ENST00000397408 TMEM110-MUSTN1A8MSY1 372 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 AXIN1O15169 862 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 PROSCO94903 275 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 EPHX1P07099 455 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 SSR1P43307 286 aaKnown RBP21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 MAPKAPK2P49137 400 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 TPI1P60174 286 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 ST8SIA6P61647 398 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 ECT2LQ008S8 904 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 RAD9BQ6WBX8 426 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 WDR5BQ86VZ2 330 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 RASSF3Q86WH2 238 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 CPNE8Q86YQ8 564 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 TMEM139Q8IV31 216 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 PSTKQ8IV42 348 aaKnown RBP21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 ZNF366Q8N895 744 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 MRGPRX3Q96LB0 322 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 KCTD15Q96SI1 283 aaPredicted RBP21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 TMEM245Q9H330 911 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 CD248Q9HCU0 757 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 LUC7LQ9NQ29 371 aaKnown RBP21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 NDFIP2Q9NV92 336 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 BCCIPQ9P287 314 aaKnown RBP eCLIP21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 EBF1Q9UH73 591 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 LCMT1Q9UIC8 334 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 ERVW-1Q9UQF0 538 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 PCDHA13Q9Y5I0 950 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 EPN1Q9Y6I3 576 aaPredicted RBP21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 CKAP5Q14008 2032 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 VPS13AQ96RL7 3174 aa21.75■■□□□ 1.07
TSPAN4-206ENST00000397408 A0A0D9SEW6 157 aa21.74■■□□□ 1.07
TSPAN4-206ENST00000397408 CCDC163A0A0D9SF12 145 aa21.74■■□□□ 1.07
TSPAN4-206ENST00000397408 SYNCRIPO60506 623 aaKnown RBP21.74■■□□□ 1.07
TSPAN4-206ENST00000397408 IPO7O95373 1038 aaKnown RBP21.74■■□□□ 1.07
TSPAN4-206ENST00000397408 SLC25A11Q02978 314 aaKnown RBP21.74■■□□□ 1.07
TSPAN4-206ENST00000397408 SULT2A1Q06520 285 aa21.74■■□□□ 1.07
TSPAN4-206ENST00000397408 PPP6R3Q5H9R7 873 aaPredicted RBP21.74■■□□□ 1.07
TSPAN4-206ENST00000397408 KCNT1Q5JUK3 1230 aa21.74■■□□□ 1.07
TSPAN4-206ENST00000397408 OR7D4Q8NG98 312 aa21.74■■□□□ 1.07
TSPAN4-206ENST00000397408 HSPH1Q92598 858 aa21.74■■□□□ 1.07
TSPAN4-206ENST00000397408 MYO19Q96H55 970 aa21.74■■□□□ 1.07
TSPAN4-206ENST00000397408 RPL10LQ96L21 214 aaKnown RBP21.74■■□□□ 1.07
TSPAN4-206ENST00000397408 PSMB7Q99436 277 aa21.74■■□□□ 1.07
TSPAN4-206ENST00000397408 TPSD1Q9BZJ3 242 aa21.74■■□□□ 1.07
TSPAN4-206ENST00000397408 RETREG1Q9H6L5 497 aa21.74■■□□□ 1.07
TSPAN4-206ENST00000397408 DNAI1Q9UI46 699 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms