RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 SAR1AQ9NR31 198 aa24.33■■□□□ 1.49
PABPN1-202ENST00000397276 TXNDC16Q9P2K2 825 aa24.33■■□□□ 1.49
PABPN1-202ENST00000397276 CCDC78A2IDD5 438 aa24.32■■□□□ 1.48
PABPN1-202ENST00000397276 TBX10O75333 385 aa24.32■■□□□ 1.48
PABPN1-202ENST00000397276 CPA2P48052 419 aa24.32■■□□□ 1.48
PABPN1-202ENST00000397276 FOXB2Q5VYV0 432 aa24.32■■□□□ 1.48
PABPN1-202ENST00000397276 RINLQ6ZS11 566 aa24.32■■□□□ 1.48
PABPN1-202ENST00000397276 RNF217Q8TC41 542 aa24.32■■□□□ 1.48
PABPN1-202ENST00000397276 AZIN2Q96A70 460 aa24.32■■□□□ 1.48
PABPN1-202ENST00000397276 GORASP1Q9BQQ3 440 aa24.32■■□□□ 1.48
PABPN1-202ENST00000397276 MTG1Q9BT17 334 aaPredicted RBP24.32■■□□□ 1.48
PABPN1-202ENST00000397276 SIK2Q9H0K1 926 aa24.32■■□□□ 1.48
PABPN1-202ENST00000397276 HHLA1C9JL84 531 aa24.32■■□□□ 1.48
PABPN1-202ENST00000397276 FCHO1O14526 889 aa24.32■■□□□ 1.48
PABPN1-202ENST00000397276 GSC2O15499 205 aa24.32■■□□□ 1.48
PABPN1-202ENST00000397276 POLBP06746 335 aa24.32■■□□□ 1.48
PABPN1-202ENST00000397276 THPOP40225 353 aa24.32■■□□□ 1.48
PABPN1-202ENST00000397276 UPP1Q16831 310 aa24.32■■□□□ 1.48
PABPN1-202ENST00000397276 MARK2Q7KZI7 788 aaKnown RBP24.32■■□□□ 1.48
PABPN1-202ENST00000397276 RSPH3Q86UC2 560 aa24.32■■□□□ 1.48
PABPN1-202ENST00000397276 EIF2B3Q9NR50 452 aaKnown RBP24.32■■□□□ 1.48
PABPN1-202ENST00000397276 CDH9Q9ULB4 789 aa24.32■■□□□ 1.48
PABPN1-202ENST00000397276 ASB3Q9Y575 518 aa24.32■■□□□ 1.48
PABPN1-202ENST00000397276 DUSP11O75319 330 aaKnown RBP24.31■■□□□ 1.48
PABPN1-202ENST00000397276 LYPLA1O75608 230 aaPredicted RBP24.31■■□□□ 1.48
PABPN1-202ENST00000397276 ITGA2BP08514 1039 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 TPH1P17752 444 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 AQP5P55064 265 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 ZBTB17Q13105 803 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 ARL13BQ3SXY8 428 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 FASTKD1Q53R41 847 aaKnown RBP24.31■■□□□ 1.48
PABPN1-202ENST00000397276 RAB41Q5JT25 222 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 OR52E8Q6IFG1 317 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 ZNF669Q96BR6 464 aaPredicted RBP24.31■■□□□ 1.48
PABPN1-202ENST00000397276 SMARCD1Q96GM5 515 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 NSL1Q96IY1 281 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 RTP3Q9BQQ7 232 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 TMLHEQ9NVH6 421 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 IGSF9Q9P2J2 1179 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 LNPEPQ9UIQ6 1025 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 F8W810 466 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 MGEA5O60502 916 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 YY1P25490 414 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 VHLP40337 213 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 OCRLQ01968 901 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 SEMA3BQ13214 749 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 STX3Q13277 289 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 IRF5Q13568 498 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 TEX44Q53QW1 395 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 TRIM42Q8IWZ5 723 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 USP33Q8TEY7 942 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 SLC9A7Q96T83 725 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 SENP6Q9GZR1 1112 aaPredicted RBP24.31■■□□□ 1.48
PABPN1-202ENST00000397276 ZNF358Q9NW07 568 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 RAB27AP51159 221 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 CERCAMQ5T4B2 595 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 PDZD4Q76G19 769 aaPredicted RBP24.31■■□□□ 1.48
PABPN1-202ENST00000397276 CMC1Q7Z7K0 106 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 CRLF3Q8IUI8 442 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 SCAMP5Q8TAC9 235 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 APBB2Q92870 758 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 NTAN1Q96AB6 310 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 CERS2Q96G23 380 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 AGAP2Q99490 1192 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 BTBD10Q9BSF8 475 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 STOML1Q9UBI4 398 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 PPARGC1AQ9UBK2 798 aaKnown RBP24.31■■□□□ 1.48
PABPN1-202ENST00000397276 PADI3Q9ULW8 664 aa24.31■■□□□ 1.48
PABPN1-202ENST00000397276 GOLGA8TH3BQL2 631 aa24.3■■□□□ 1.48
PABPN1-202ENST00000397276 LRIG2O94898 1065 aa24.3■■□□□ 1.48
PABPN1-202ENST00000397276 CD68P34810 354 aaPredicted RBP24.3■■□□□ 1.48
PABPN1-202ENST00000397276 LBRQ14739 615 aaKnown RBP24.3■■□□□ 1.48
PABPN1-202ENST00000397276 RWDD4Q6NW29 188 aaKnown RBP24.3■■□□□ 1.48
PABPN1-202ENST00000397276 BHLHA9Q7RTU4 235 aa24.3■■□□□ 1.48
PABPN1-202ENST00000397276 PTCD3Q96EY7 689 aaKnown RBP24.3■■□□□ 1.48
PABPN1-202ENST00000397276 C7orf26Q96N11 449 aa24.3■■□□□ 1.48
PABPN1-202ENST00000397276 EMCNQ9ULC0 261 aa24.3■■□□□ 1.48
PABPN1-202ENST00000397276 ESRRAP11474 423 aaPredicted RBP24.3■■□□□ 1.48
PABPN1-202ENST00000397276 TYK2P29597 1187 aa24.3■■□□□ 1.48
PABPN1-202ENST00000397276 PPP2R5DQ14738 602 aa24.3■■□□□ 1.48
PABPN1-202ENST00000397276 CWF19L1Q69YN2 538 aaKnown RBP24.3■■□□□ 1.48
PABPN1-202ENST00000397276 TIFABQ6ZNK6 161 aa24.3■■□□□ 1.48
PABPN1-202ENST00000397276 CYS1Q717R9 158 aa24.3■■□□□ 1.48
PABPN1-202ENST00000397276 MFSD3Q96ES6 412 aa24.3■■□□□ 1.48
PABPN1-202ENST00000397276 RILPQ96NA2 401 aa24.3■■□□□ 1.48
PABPN1-202ENST00000397276 ARHGAP39Q9C0H5 1083 aa24.3■■□□□ 1.48
PABPN1-202ENST00000397276 MKS1Q9NXB0 559 aa24.3■■□□□ 1.48
PABPN1-202ENST00000397276 VANGL2Q9ULK5 521 aa24.3■■□□□ 1.48
PABPN1-202ENST00000397276 WASF2Q9Y6W5 498 aa24.3■■□□□ 1.48
PABPN1-202ENST00000397276 SF3B1O75533 1304 aaKnown RBP eCLIP24.29■■□□□ 1.485e-8■■■■■ 42.1
PABPN1-202ENST00000397276 GYG2O15488 501 aa24.29■■□□□ 1.48
PABPN1-202ENST00000397276 ITM2AO43736 263 aa24.29■■□□□ 1.48
PABPN1-202ENST00000397276 JCHAINP01591 159 aa24.29■■□□□ 1.48
PABPN1-202ENST00000397276 NFKB1P19838 968 aa24.29■■□□□ 1.48
PABPN1-202ENST00000397276 TRIM32Q13049 653 aa24.29■■□□□ 1.48
PABPN1-202ENST00000397276 TAC4Q86UU9 113 aa24.29■■□□□ 1.48
PABPN1-202ENST00000397276 IFNL1Q8IU54 200 aa24.29■■□□□ 1.48
PABPN1-202ENST00000397276 KBTBD2Q8IY47 623 aa24.29■■□□□ 1.48
PABPN1-202ENST00000397276 DDX50Q9BQ39 737 aaKnown RBP24.29■■□□□ 1.48
PABPN1-202ENST00000397276 CCDC22O60826 627 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms