RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 CEP170Q5SW79 1584 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 ADSSP30520 456 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 PDIA5Q14554 519 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 FBXO39Q8N4B4 442 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 CPNE1Q99829 537 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 A0A1W2PQ72 361 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 KIF28PB7ZC32 967 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 LRG1P02750 347 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 SERPINE1P05121 402 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 TMEM253P0C7T8 217 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 SIPA1Q96FS4 1042 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 STRBPQ96SI9 672 aaKnown RBP10.5□□□□□ -0.73
COL4A4-201ENST00000396625 GNPTGQ9UJJ9 305 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 CAMSAP1Q5T5Y3 1602 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 PRH1P02810 166 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 IL6STP40189 918 aaPredicted RBP10.5□□□□□ -0.73
COL4A4-201ENST00000396625 ZMYND11Q15326 602 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 SLFN11Q7Z7L1 901 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 DCP1BQ8IZD4 617 aaKnown RBP10.5□□□□□ -0.73
COL4A4-201ENST00000396625 DENND6BQ8NEG7 585 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 FICDQ9BVA6 458 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 FAM172BPA6NC97 362 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 CDC25CP30307 473 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 QRICH1Q2TAL8 776 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 PARP8Q8N3A8 854 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 TTC29Q8NA56 475 aaPredicted RBP10.5□□□□□ -0.73
COL4A4-201ENST00000396625 ITCHQ96J02 903 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 TBCDQ9BTW9 1192 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 MORF4L1Q9UBU8 362 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 PREX2Q70Z35 1606 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 CDK12Q9NYV4 1490 aaPredicted RBP10.5□□□□□ -0.73
COL4A4-201ENST00000396625 GSAPA4D1B5 854 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 SAGE2PA6NJ88 616 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 FCHO1O14526 889 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 RECQL5O94762 991 aaPredicted RBP10.5□□□□□ -0.73
COL4A4-201ENST00000396625 MPP3Q13368 585 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 RFX4Q33E94 735 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 STRIP1Q5VSL9 837 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 ARHGAP36Q6ZRI8 547 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 OFCC1Q8IZS5 231 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 COA1Q9GZY4 146 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 GANQ9H2C0 597 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 M0QYT0 321 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 MT-CO1P00395 513 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 SERPINA3P01011 423 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 NCK1P16333 377 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 CRATP43155 626 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 HIRAP54198 1017 aaPredicted RBP10.5□□□□□ -0.73
COL4A4-201ENST00000396625 TMEM121Q9BTD3 319 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 PTGFRNQ9P2B2 879 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 SLC12A4Q9UP95 1085 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 ASXL3Q9C0F0 2248 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 TTLL13PA6NNM8 815 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 ACSL4O60488 711 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 PHF10Q8WUB8 498 aaKnown RBP10.5□□□□□ -0.73
COL4A4-201ENST00000396625 PNPLA3Q9NST1 481 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 SSR3Q9UNL2 185 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 RBMX2Q9Y388 322 aaKnown RBP10.5□□□□□ -0.73
COL4A4-201ENST00000396625 PGRMC2O15173 223 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 MAP3K6O95382 1288 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 PTDSS1P48651 473 aaKnown RBP10.49□□□□□ -0.73
COL4A4-201ENST00000396625 TNFAIP8L3Q5GJ75 292 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 IL27RAQ6UWB1 636 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 GALNTL5Q7Z4T8 443 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 RNF148Q8N7C7 305 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 ZNF540Q8NDQ6 660 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 CCDC177Q9NQR7 707 aaPredicted RBP10.49□□□□□ -0.73
COL4A4-201ENST00000396625 GMPPBQ9Y5P6 360 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 DCXO43602 365 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 CTSHP09668 335 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 ITGA4P13612 1032 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 ALDH5A1P51649 535 aaPredicted RBP10.49□□□□□ -0.73
COL4A4-201ENST00000396625 MYBPC3Q14896 1274 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 EPC2Q52LR7 807 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 BOLA3Q53S33 107 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 IER5Q5VY09 327 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 RBM44Q6ZP01 1051 aaKnown RBP10.49□□□□□ -0.73
COL4A4-201ENST00000396625 IL17REQ8NFR9 667 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 TMEM165Q9HC07 324 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 SLC24A2Q9UI40 661 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 PSMG1O95456 288 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 KCNA6P17658 529 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.49□□□□□ -0.73
COL4A4-201ENST00000396625 RAB11FIP2Q7L804 512 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 APOBEC3FQ8IUX4 373 aaKnown RBP10.49□□□□□ -0.73
COL4A4-201ENST00000396625 DNAJC1Q96KC8 554 aaKnown RBP10.49□□□□□ -0.73
COL4A4-201ENST00000396625 VPS28Q9UK41 221 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 ERVK-7P63135 1459 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 WRBO00258 174 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 PLEKP08567 350 aaPredicted RBP10.49□□□□□ -0.73
COL4A4-201ENST00000396625 MUTP22033 750 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 NTSP30990 170 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 RAPSNQ13702 412 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 POU6F1Q14863 301 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 PDK3Q15120 406 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 KCNA10Q16322 511 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 BRSK2Q8IWQ3 736 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 DEPDC4Q8N2C3 294 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 SLC6A15Q9H2J7 730 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 COMMD3-BMI1R4GMX3 469 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms