RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 SENP1Q9P0U3 644 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 CHADO15335 359 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 KCNJ2P63252 427 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 STX3Q13277 289 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 CNGA3Q16281 694 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 NFE2Q16621 373 aaPredicted RBP16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 NAT14Q8WUY8 206 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 SLCO2A1Q92959 643 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 NMUR1Q9HB89 426 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 CRYL1Q9Y2S2 319 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 NR2C2P49116 596 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 TAF1BQ53T94 588 aaPredicted RBP16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 HABP4Q5JVS0 413 aaKnown RBP16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 DENND1CQ8IV53 801 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 NPWQ8N729 165 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 TP73O15350 636 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 TLR5O60602 858 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 PRKCGP05129 697 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 TAC1P20366 129 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 NSUN2Q08J23 767 aaKnown RBP eCLIP16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 BFSP2Q13515 415 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 SLC12A1Q13621 1099 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 ZNF460Q14592 562 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 PCBP1Q15365 356 aaKnown RBP eCLIP16.25■□□□□ 0.193e-7■■■■■ 30.1
SMARCD1-202ENST00000394963 CFAP61Q8NHU2 1237 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 DTX3LQ8TDB6 740 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 ABCC13Q9NSE7 274 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 GTSE1Q9NYZ3 720 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 PSAT1Q9Y617 370 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 TSPAN8P19075 237 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 SERPINB3P29508 390 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 FDFT1P37268 417 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 CD86P42081 329 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 COG7P83436 770 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 FBXO48Q5FWF7 155 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 STK32AQ8WU08 396 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 TEKT4Q8WW24 435 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 ZNF778Q96MU6 729 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 ANLNQ9NQW6 1124 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 NDFIP2Q9NV92 336 aa16.25■□□□□ 0.19
SMARCD1-202ENST00000394963 OPHN1O60890 802 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 DGKIO75912 1065 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 HAUS5O94927 633 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 CKMP06732 381 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 BTG3Q14201 252 aaPredicted RBP16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 ZRSR2Q15696 482 aaKnown RBP16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 TPGS1Q6ZTW0 290 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 NUP93Q8N1F7 819 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 NPY6RQ99463 290 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 ACBD6Q9BR61 282 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 CCSER2Q9H7U1 834 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 ADAM28Q9UKQ2 775 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 DSEQ9UL01 958 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 AMHP03971 560 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 SKIP12755 728 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 AQP5P55064 265 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 CAP1Q01518 475 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 SEMG2Q02383 582 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 ANO4Q32M45 955 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 CAND1Q86VP6 1230 aaKnown RBP16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 POU5F2Q8N7G0 328 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 YME1L1Q96TA2 773 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 MAN1C1Q9NR34 630 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 KLC4Q9NSK0 619 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 PACSIN3Q9UKS6 424 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 EFR3BQ9Y2G0 817 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 MPP3Q13368 585 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 SNCBQ16143 134 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 OTOAQ7RTW8 1153 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 C14orf80Q86SX3 495 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 RIBC1Q8N443 379 aaPredicted RBP16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 RFWD2Q8NHY2 731 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 NUDCD1Q96RS6 583 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 CCDC68Q9H2F9 335 aa16.24■□□□□ 0.19
SMARCD1-202ENST00000394963 GYG2O15488 501 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 ZWINTO95229 277 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 GJA1P17302 382 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 PTPN3P26045 913 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 USP46P62068 366 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 ZBTB17Q13105 803 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 MARC1Q5VT66 337 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 ZNF470Q6ECI4 717 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 MFSD5Q6N075 450 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 DRICH1Q6PGQ1 229 aaPredicted RBP16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 ALKAL1Q6UXT8 129 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 LINGO4Q6UY18 593 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 SDCCAG8Q86SQ7 713 aaPredicted RBP16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 KCNMB4Q86W47 210 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 LRRC40Q9H9A6 602 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 FBXW11Q9UKB1 542 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 CNTN5O94779 1100 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 ALDH1A3P47895 512 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 KCNQ1P51787 676 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 TLE2Q04725 743 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 CRYMQ14894 314 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 CARNMT1Q8N4J0 409 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 FRMD8P1Q9BZ68 369 aaPredicted RBP16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 TM6SF2Q9BZW4 377 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 ZMYND8Q9ULU4 1186 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms