RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 WNT9AO14904 365 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 MID1O15344 667 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 NDUFS2O75306 463 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 GFPT2O94808 682 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 MT-CO1P00395 513 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 CYP1A1P04798 512 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-205ENST00000394892 IGHV4-34P06331 123 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 ATP5BP06576 529 aaKnown RBP9.13□□□□□ -0.95
ATG4A-205ENST00000394892 SYPP08247 313 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 ATP1A3P13637 1013 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 OXTRP30559 389 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 CCR1P32246 355 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 ANP32AP39687 249 aaKnown RBP9.13□□□□□ -0.95
ATG4A-205ENST00000394892 PLK1P53350 603 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 COPB1P53618 953 aaKnown RBP9.13□□□□□ -0.95
ATG4A-205ENST00000394892 RNASE9P60153 205 aaKnown RBP9.13□□□□□ -0.95
ATG4A-205ENST00000394892 POLR2FP61218 127 aaKnown RBP9.13□□□□□ -0.95
ATG4A-205ENST00000394892 ECT2LQ008S8 904 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 CDH18Q13634 790 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 ZNF423Q2M1K9 1284 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 NAA35Q5VZE5 725 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 RGL4Q8IZJ4 473 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 STK40Q8N2I9 435 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 AADATQ8N5Z0 425 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 ATP6V0D2Q8N8Y2 350 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 KDM1BQ8NB78 822 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 TMEM35BQ8NCS4 154 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 FOXJ1Q92949 421 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 VOPP1Q96AW1 172 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 C18orf8Q96DM3 657 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 PGAP3Q96FM1 320 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-205ENST00000394892 DDX50Q9BQ39 737 aaKnown RBP9.13□□□□□ -0.95
ATG4A-205ENST00000394892 FEM1AQ9BSK4 669 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 NUP58Q9BVL2 599 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 NEUROG2Q9H2A3 272 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 PABPC3Q9H361 631 aaKnown RBP9.13□□□□□ -0.95
ATG4A-205ENST00000394892 FAM207AQ9NSI2 230 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-205ENST00000394892 TMEM63CQ9P1W3 806 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 KIAA1522Q9P206 1035 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-205ENST00000394892 LIMA1Q9UHB6 759 aaKnown RBP9.13□□□□□ -0.95
ATG4A-205ENST00000394892 SARDHQ9UL12 918 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 VANGL2Q9ULK5 521 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-205ENST00000394892 PCDHB9Q9Y5E1 797 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 THADAQ6YHU6 1953 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 A0A1B0GVM2 712 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 A0A1B0GVT2 93 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 TCAF2A6NFQ2 919 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 DRGXA6NNA5 263 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 F5H5T6 163 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 GOLGA8SH3BPF8 625 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 K7ERQ8 282 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 PES1O00541 588 aaKnown RBP9.12□□□□□ -0.95
ATG4A-205ENST00000394892 KCNK3O14649 394 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 SH3BP5O60239 455 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 SNAP91O60641 907 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 CBFA2T3O75081 653 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 ENDOD1O94919 500 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 ASLP04424 464 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 WNT1P04628 370 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 DRD3P35462 400 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 SCNN1AP37088 669 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 CSNK1EP49674 416 aaKnown RBP9.12□□□□□ -0.95
ATG4A-205ENST00000394892 GALCP54803 685 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 BPIFB4P59827 614 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 ARID5AQ03989 594 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 SYCP1Q15431 976 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 WDR45BQ5MNZ6 344 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 ZNF776Q68DI1 518 aaPredicted RBP9.12□□□□□ -0.95
ATG4A-205ENST00000394892 ERICH1Q86X53 443 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 MMAAQ8IVH4 418 aaKnown RBP9.12□□□□□ -0.95
ATG4A-205ENST00000394892 EMC1Q8N766 993 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 JOSD2Q8TAC2 188 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 SLC30A5Q8TAD4 765 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 FAM131CQ96AQ9 280 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 BIRC7Q96CA5 298 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 CFAP57Q96MR6 1250 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 RPRD1AQ96P16 312 aaPredicted RBP9.12□□□□□ -0.95
ATG4A-205ENST00000394892 TRIM62Q9BVG3 475 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 TKTL2Q9H0I9 626 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 SIK2Q9H0K1 926 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 MIR1-1HGQ9H1L0 117 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 TM9SF3Q9HD45 589 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 NLRC4Q9NPP4 1024 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.12□□□□□ -0.95
ATG4A-205ENST00000394892 MPP6Q9NZW5 540 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 SUN2Q9UH99 717 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 DACH1Q9UI36 760 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 KLK13Q9UKR3 277 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 NEU3Q9UQ49 428 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 FNDC3AQ9Y2H6 1198 aaKnown RBP9.12□□□□□ -0.95
ATG4A-205ENST00000394892 TBC1D30Q9Y2I9 924 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 CKAP5Q14008 2032 aa9.12□□□□□ -0.95
ATG4A-205ENST00000394892 ASCC3Q8N3C0 2202 aaKnown RBP9.11□□□□□ -0.95
ATG4A-205ENST00000394892 IGLV3-10A0A075B6K4 115 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 A0A0D9SEW6 157 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 A0A1B0GTW7 788 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 A0A1W2PP55 124 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 TCRBV5S1A1TA0A578 114 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 TARSL2A2RTX5 802 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms