RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 CYS1Q717R9 158 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 ZNF410Q86VK4 478 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 SNX31Q8N9S9 440 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 AFG1LQ8WV93 481 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 TRIM63Q969Q1 353 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 RCN3Q96D15 328 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 DCUN1D5Q9BTE7 237 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 ACE2Q9BYF1 805 aaPredicted RBP8.78□□□□□ -1
GABRA1-202ENST00000393943 UNC93B1Q9H1C4 597 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 RAD21L1Q9H4I0 556 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 TEX264Q9Y6I9 313 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 MDM4O15151 490 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 ATP6V1G1O75348 118 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 DHRS4L1P0CG22 281 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 ITGB5P18084 799 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 ATP5F1P24539 256 aaPredicted RBP8.78□□□□□ -1
GABRA1-202ENST00000393943 MRPS15P82914 257 aaKnown RBP8.78□□□□□ -1
GABRA1-202ENST00000393943 TTLL12Q14166 644 aaPredicted RBP8.78□□□□□ -1
GABRA1-202ENST00000393943 NADK2Q4G0N4 442 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 ZCCHC7Q8N3Z6 543 aaKnown RBP8.78□□□□□ -1
GABRA1-202ENST00000393943 ATPAF2Q8N5M1 289 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 DNERQ8NFT8 737 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 VPS33AQ96AX1 596 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 RMDN1Q96DB5 314 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 ITPKCQ96DU7 683 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 ABHD8Q96I13 439 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 CCDC106Q9BWC9 280 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 PREBQ9HCU5 417 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 IARS2Q9NSE4 1012 aaKnown RBP8.78□□□□□ -1
GABRA1-202ENST00000393943 UBR2Q8IWV8 1755 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 WTIPA6NIX2 430 aaPredicted RBP8.78□□□□□ -1
GABRA1-202ENST00000393943 RNF103O00237 685 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 AVILO75366 819 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 LCP1P13796 627 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 ADSSP30520 456 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 CD151P48509 253 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 HIRAP54198 1017 aaPredicted RBP8.78□□□□□ -1
GABRA1-202ENST00000393943 ATXN3P54252 364 aaPredicted RBP8.78□□□□□ -1
GABRA1-202ENST00000393943 SPATS1Q496A3 300 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 CRY2Q49AN0 593 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 FAM98BQ52LJ0 330 aaKnown RBP8.78□□□□□ -1
GABRA1-202ENST00000393943 DPY19L2Q6NUT2 758 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 DAW1Q8N136 415 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 OR9Q1Q8NGQ5 310 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 ZNF420Q8TAQ5 688 aaPredicted RBP8.78□□□□□ -1
GABRA1-202ENST00000393943 SEPT8Q92599 483 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 FAM136AQ96C01 138 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 RHOBTB2Q9BYZ6 727 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 CATSPERBQ9H7T0 1116 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 SNX15Q9NRS6 342 aa8.78□□□□□ -1
GABRA1-202ENST00000393943 LAMB1P07942 1786 aa8.77□□□□□ -1
GABRA1-202ENST00000393943 BCORQ6W2J9 1755 aa8.77□□□□□ -1
GABRA1-202ENST00000393943 FAM159BA6NKW6 160 aa8.77□□□□□ -1
GABRA1-202ENST00000393943 ZNF487B1APH4 448 aa8.77□□□□□ -1
GABRA1-202ENST00000393943 NFIBO00712 420 aa8.77□□□□□ -1
GABRA1-202ENST00000393943 GRAP2O75791 330 aa8.77□□□□□ -1
GABRA1-202ENST00000393943 PYGLP06737 847 aa8.77□□□□□ -1
GABRA1-202ENST00000393943 PKNOX1P55347 436 aa8.77□□□□□ -1
GABRA1-202ENST00000393943 ATP1A4Q13733 1029 aa8.77□□□□□ -1
GABRA1-202ENST00000393943 NR1D2Q14995 579 aa8.77□□□□□ -1
GABRA1-202ENST00000393943 TIGD7Q6NT04 549 aaPredicted RBP8.77□□□□□ -1
GABRA1-202ENST00000393943 ILDR2Q71H61 639 aa8.77□□□□□ -1
GABRA1-202ENST00000393943 RYBPQ8N488 228 aaPredicted RBP8.77□□□□□ -1
GABRA1-202ENST00000393943 ANKRD52Q8NB46 1076 aa8.77□□□□□ -1
GABRA1-202ENST00000393943 CMASQ8NFW8 434 aaPredicted RBP8.77□□□□□ -1
GABRA1-202ENST00000393943 HAPLN3Q96S86 360 aa8.77□□□□□ -1
GABRA1-202ENST00000393943 MRPL57Q9BQC6 102 aaKnown RBP8.77□□□□□ -1
GABRA1-202ENST00000393943 COMMD8Q9NX08 183 aa8.77□□□□□ -1
GABRA1-202ENST00000393943 IGSF9Q9P2J2 1179 aa8.77□□□□□ -1
GABRA1-202ENST00000393943 SAE1Q9UBE0 346 aaPredicted RBP8.77□□□□□ -1
GABRA1-202ENST00000393943 GNPTGQ9UJJ9 305 aa8.77□□□□□ -1
GABRA1-202ENST00000393943 MAGED2Q9UNF1 606 aaPredicted RBP8.77□□□□□ -1
GABRA1-202ENST00000393943 GINS2Q9Y248 185 aa8.77□□□□□ -1
GABRA1-202ENST00000393943 SNX9Q9Y5X1 595 aa8.77□□□□□ -1
GABRA1-202ENST00000393943 MARF1Q9Y4F3 1742 aaKnown RBP8.77□□□□□ -1.01
GABRA1-202ENST00000393943 C1orf232A0A0U1RR37 186 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 ACKR2O00590 384 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 CNOT3O75175 753 aaKnown RBP8.77□□□□□ -1.01
GABRA1-202ENST00000393943 PIGRP01833 764 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 TGFB3P10600 412 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 UMPSP11172 480 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 ADORA2BP29275 332 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 AIF1P55008 147 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 TRIM25Q14258 630 aaKnown RBP8.77□□□□□ -1.01
GABRA1-202ENST00000393943 KCNJ11Q14654 390 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 TTLL4Q14679 1199 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 ZBED5Q49AG3 693 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 CATSPER4Q7RTX7 472 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 MIER2Q8N344 545 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 UGT2B28Q9BY64 529 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 PNPOQ9NVS9 261 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 KIF17Q9P2E2 1029 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 ANAPC2Q9UJX6 822 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 SF3B1O75533 1304 aaKnown RBP eCLIP8.77□□□□□ -1.01
GABRA1-202ENST00000393943 PNMA8CA0A1B0GUJ8 204 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 TMEM63AO94886 807 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 LRPAP1P30533 357 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 INPP1P49441 399 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 IL1RL1Q01638 556 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 NRF1Q16656 503 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms