RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ZNF516Q92618 1163 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 OMDQ99983 421 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 C17orf80Q9BSJ5 609 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 CYP3A43Q9HB55 503 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 MYOZ2Q9NPC6 264 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 MRGBPQ9NV56 204 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 KIAA1257Q9ULG3 409 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 KAT6AQ92794 2004 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 TIPRLO75663 272 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 VAPBO95292 243 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 GM2AP17900 193 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 PSMB9P28065 219 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 NAPEPLDQ6IQ20 393 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 FAM183BPQ6ZVS7 135 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 DCAKDQ8WVC6 231 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 FAM162AQ96A26 154 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 APBA2Q99767 749 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 OSBPL11Q9BXB4 747 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 UTP6Q9NYH9 597 aaKnown RBP14.53□□□□□ -0.08
RTF1-201ENST00000389629 HACD3Q9P035 362 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 MYOCOSA0A1B0GUC4 107 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 CRTAMO95727 393 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 HSD17B4P51659 736 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 SLC18A1P54219 525 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 GTF2H3Q13889 308 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 NOMO1Q15155 1222 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 SAMD4BQ5PRF9 694 aaKnown RBP14.53□□□□□ -0.08
RTF1-201ENST00000389629 THUMPD3Q9BV44 507 aaKnown RBP14.53□□□□□ -0.08
RTF1-201ENST00000389629 NSMCE4AQ9NXX6 385 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 ZNF142P52746 1687 aaPredicted RBP14.52□□□□□ -0.08
RTF1-201ENST00000389629 LACTBL1A8MY62 500 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 HDAC3O15379 428 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 UGT1A9O60656 530 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 ERBB2P04626 1255 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 IVDP26440 423 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 NUMBP49757 651 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 DEFA1P59665 94 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 DEFA3P59666 94 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 RALGDSQ12967 914 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 DMC1Q14565 340 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 KYAT1Q16773 422 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 RSBN1Q5VWQ0 802 aaPredicted RBP14.52□□□□□ -0.08
RTF1-201ENST00000389629 TWF2Q6IBS0 349 aaKnown RBP14.52□□□□□ -0.08
RTF1-201ENST00000389629 DEFB129Q9H1M3 183 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 UGT1A7Q9HAW7 530 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 UGT1A10Q9HAW8 530 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 UGT1A8Q9HAW9 530 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 SCN3BQ9NY72 215 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 SYNPO2Q9UMS6 1093 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 SATB2Q9UPW6 733 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 PSMD12O00232 456 aaPredicted RBP14.52□□□□□ -0.08
RTF1-201ENST00000389629 EDIL3O43854 480 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 ACADSBP45954 432 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 GRIA4P48058 902 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 CHRNB3Q05901 458 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 SPIDRQ14159 915 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 KIZQ2M2Z5 673 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 TAF2Q6P1X5 1199 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 KCNMB4Q86W47 210 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 TREML1Q86YW5 311 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 PARP8Q8N3A8 854 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 SPATA6LQ8N4H0 392 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 BORCS5Q969J3 196 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 ZNF560Q96MR9 790 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 CPNE1Q99829 537 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 CAB39LQ9H9S4 337 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 PPME1Q9Y570 386 aa14.52□□□□□ -0.08
RTF1-201ENST00000389629 TRIM43BA6NCK2 446 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 SUPT3HB4E1H0 165 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 TYROBPO43914 113 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 JCHAINP01591 159 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 JAK1P23458 1154 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 CAPSQ13938 189 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 DGCR6Q14129 220 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 POU6F1Q14863 301 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 ARMCX6Q7L4S7 300 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 FASTKD5Q7L8L6 764 aaKnown RBP14.52□□□□□ -0.09
RTF1-201ENST00000389629 RP9Q8TA86 221 aaKnown RBP14.52□□□□□ -0.09
RTF1-201ENST00000389629 DDX1Q92499 740 aaKnown RBP14.52□□□□□ -0.09
RTF1-201ENST00000389629 IFT43Q96FT9 208 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 RAB26Q9ULW5 256 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 CHD4Q14839 1912 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 ATP6AP2A0A1C7CYW4 349 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 TRIM38O00635 465 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 ATP6AP2O75787 350 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 LDLRP01130 860 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 CRHR1P34998 444 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 RAD23AP54725 363 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 BACE1P56817 501 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 CARTPTQ16568 116 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 SAMD7Q7Z3H4 446 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 METTL23Q86XA0 190 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 TFAP2BQ92481 460 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 ULK4Q96C45 1275 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 RTKNQ9BST9 563 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 C1orf50Q9BV19 199 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 MAGEB5Q9BZ81 275 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 EGFL7Q9UHF1 273 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 EFR3BQ9Y2G0 817 aa14.52□□□□□ -0.09
RTF1-201ENST00000389629 MPSTP25325 297 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms