RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 GTSE1Q9NYZ3 720 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 CNTN6Q9UQ52 1028 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 SQORQ9Y6N5 450 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 GOLGA8TH3BQL2 631 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 MATN2O00339 956 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 ZNF195O14628 629 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 HDAC3O15379 428 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 USP12O75317 370 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 E2F6O75461 281 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 UGT1A6P19224 532 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 UGT1A1P22309 533 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 UGT1A4P22310 534 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 UGT1A3P35503 534 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 UGT1A5P35504 534 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 HARS2P49590 506 aaKnown RBP12.42□□□□□ -0.42
HERC6-203ENST00000380265 TGFB2P61812 414 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 PDCD4Q53EL6 469 aaKnown RBP12.42□□□□□ -0.42
HERC6-203ENST00000380265 TMEM53Q6P2H8 277 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 SETD3Q86TU7 594 aaPredicted RBP12.42□□□□□ -0.42
HERC6-203ENST00000380265 CHERPQ8IWX8 916 aaKnown RBP12.42□□□□□ -0.42
HERC6-203ENST00000380265 TMEM130Q8N3G9 435 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 CERKQ8TCT0 537 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 FNIP1Q8TF40 1166 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 CXorf21Q9HAI6 301 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 FAM49BQ9NUQ9 324 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 TLK1Q9UKI8 766 aa12.42□□□□□ -0.42
HERC6-203ENST00000380265 FUOMA2VDF0 154 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 BCAS2O75934 225 aaPredicted RBP12.41□□□□□ -0.42
HERC6-203ENST00000380265 MICAL2O94851 1124 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 CDH3P22223 829 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 CYP2F1P24903 491 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 SDC4P31431 198 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 GP5P40197 560 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 PGGT1BP53609 377 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 PSME3P61289 254 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 CLDN10P78369 228 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 BAATQ14032 418 aaPredicted RBP12.41□□□□□ -0.42
HERC6-203ENST00000380265 DGKDQ16760 1214 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 EGFLAMQ63HQ2 1017 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 TIFABQ6ZNK6 161 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 CENPSQ8N2Z9 138 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 RSPH1Q8WYR4 309 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 SGF29Q96ES7 293 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 CCDC97Q96F63 343 aaPredicted RBP12.41□□□□□ -0.42
HERC6-203ENST00000380265 PLEKHA8Q96JA3 519 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 APBA2Q99767 749 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 POLR1BQ9H9Y6 1135 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 JPH1Q9HDC5 661 aaPredicted RBP12.41□□□□□ -0.42
HERC6-203ENST00000380265 IGSF9Q9P2J2 1179 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 SLC39A10Q9ULF5 831 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 AFG3L2Q9Y4W6 797 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 TNRC6CQ9HCJ0 1690 aaKnown RBP12.41□□□□□ -0.42
HERC6-203ENST00000380265 SYNJ2BP-COX16A0A087WUM0 186 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 KCNU1A8MYU2 1149 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 MT-CO1P00395 513 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 HOXD12P35452 270 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 AVPR1AP37288 418 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 GJA8P48165 433 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 ZNF143P52747 638 aaPredicted RBP12.41□□□□□ -0.42
HERC6-203ENST00000380265 NR1D2Q14995 579 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 CCDC153Q494R4 210 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 METTL21CQ5VZV1 264 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 OLFML1Q6UWY5 402 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 PODNQ7Z5L7 613 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 MCUQ8NE86 351 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 ANKRD36BP1Q96IX9 119 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 PIWIL1Q96J94 861 aaKnown RBP12.41□□□□□ -0.42
HERC6-203ENST00000380265 BIRC8Q96P09 236 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 UPF3AQ9H1J1 476 aaKnown RBP12.41□□□□□ -0.42
HERC6-203ENST00000380265 COX16Q9P0S2 106 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 PADI4Q9UM07 663 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 PCDHGC3Q9UN70 934 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 PRSS51A0A1B0GVH4 220 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 TMEM247A6NEH6 219 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 TRIM38O00635 465 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 GPC4O75487 556 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 CLIC3O95833 236 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 ZNF26P17031 533 aaPredicted RBP12.41□□□□□ -0.42
HERC6-203ENST00000380265 CAP2P40123 477 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 DPP6P42658 865 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 RPL14P50914 215 aaKnown RBP12.41□□□□□ -0.42
HERC6-203ENST00000380265 FSTL1Q12841 308 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 NME3Q13232 169 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 ARMCX6Q7L4S7 300 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 FIBCD1Q8N539 461 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 LPGAT1Q92604 370 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 SNRNP25Q9BV90 132 aaKnown RBP12.41□□□□□ -0.42
HERC6-203ENST00000380265 IL1RL2Q9HB29 575 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 NMRAL1Q9HBL8 299 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 USP21Q9UK80 565 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 SLC8A2Q9UPR5 921 aa12.41□□□□□ -0.42
HERC6-203ENST00000380265 FAM149AA5PLN7 773 aa12.4□□□□□ -0.42
HERC6-203ENST00000380265 STRCP1A6NGW2 1772 aa12.4□□□□□ -0.42
HERC6-203ENST00000380265 TGM2P21980 687 aa12.4□□□□□ -0.42
HERC6-203ENST00000380265 SPRP35270 261 aaPredicted RBP12.4□□□□□ -0.42
HERC6-203ENST00000380265 GRIA4P48058 902 aa12.4□□□□□ -0.42
HERC6-203ENST00000380265 ACTR2P61160 394 aa12.4□□□□□ -0.42
HERC6-203ENST00000380265 TRIM16LQ309B1 348 aa12.4□□□□□ -0.42
HERC6-203ENST00000380265 DCAF6Q58WW2 860 aa12.4□□□□□ -0.42
HERC6-203ENST00000380265 ARL13AQ5H913 290 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms