RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 C2CD4BA6NLJ0 364 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 H3BNH8 94 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 USP12O75317 370 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 BCAS2O75934 225 aaPredicted RBP16.2■□□□□ 0.18
CKAP4-201ENST00000378026 TFE3P19532 575 aaPredicted RBP16.2■□□□□ 0.18
CKAP4-201ENST00000378026 CTBSQ01459 385 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 CNTN2Q02246 1040 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 ZNF667Q5HYK9 610 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 SEL1L3Q68CR1 1132 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 LAYNQ6UX15 382 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 PGAM4Q8N0Y7 254 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 LRRC43Q8N309 656 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 RTP4Q96DX8 246 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 RANBP9Q96S59 729 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 AGAP2Q99490 1192 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 LGMNQ99538 433 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 SYNPO2Q9UMS6 1093 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 CCDC78A2IDD5 438 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 GOLGA8TH3BQL2 631 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 PSMD12O00232 456 aaPredicted RBP16.2■□□□□ 0.18
CKAP4-201ENST00000378026 NPM3O75607 178 aaKnown RBP16.2■□□□□ 0.18
CKAP4-201ENST00000378026 RGS20O76081 388 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 PIGNO95427 931 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 ARSAP15289 507 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 TGM2P21980 687 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 CCND2P30279 289 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 CAPSQ13938 189 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 CCDC14Q49A88 953 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 CROCCP3Q8IVE0 287 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 CDKL3Q8IVW4 592 aaPredicted RBP16.2■□□□□ 0.18
CKAP4-201ENST00000378026 ISOC1Q96CN7 298 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 EFCAB1Q9HAE3 211 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 A0A096LPK6 155 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 TRIM13O60858 407 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 ALDH3B2P48448 385 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 NUP107P57740 925 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 GK5Q6ZS86 529 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 STRA8Q7Z7C7 330 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 VSIG10LQ86VR7 867 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 FAM49BQ9NUQ9 324 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 MTMR10Q9NXD2 777 aa16.2■□□□□ 0.18
CKAP4-201ENST00000378026 G3V2L1 256 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 TK2O00142 265 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 ACOT8O14734 319 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 GIPC1O14908 333 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 TNNC2P02585 160 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 NPR1P16066 1061 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 PORP16435 677 aaPredicted RBP16.19■□□□□ 0.18
CKAP4-201ENST00000378026 HDCP19113 662 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 PPARGP37231 505 aaPredicted RBP16.19■□□□□ 0.18
CKAP4-201ENST00000378026 GPD2P43304 727 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 RXRGP48443 463 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 RSBN1LQ6PCB5 846 aaPredicted RBP16.19■□□□□ 0.18
CKAP4-201ENST00000378026 COLGALT1Q8NBJ5 622 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 ACVR1CQ8NER5 493 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 APBA2Q99767 749 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 ZDHHC2Q9UIJ5 367 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.19■□□□□ 0.18
CKAP4-201ENST00000378026 KCNU1A8MYU2 1149 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 TMEM233B4DJY2 109 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 PLA2G6O60733 806 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 OATP04181 439 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 EPHX2P34913 555 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 PHKA2P46019 1235 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 NAGLUP54802 743 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 ESRRGP62508 458 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 VPS72Q15906 364 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 ARL13AQ5H913 290 aaPredicted RBP16.19■□□□□ 0.18
CKAP4-201ENST00000378026 METTL21CQ5VZV1 264 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 ABHD15Q6UXT9 468 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 TMEM192Q8IY95 271 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 ALDH16A1Q8IZ83 802 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 FAM110BQ8TC76 370 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 ARNTL2Q8WYA1 636 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 TBC1D23Q9NUY8 699 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 PADI4Q9UM07 663 aa16.19■□□□□ 0.18
CKAP4-201ENST00000378026 KLRG2A4D1S0 409 aaPredicted RBP16.18■□□□□ 0.18
CKAP4-201ENST00000378026 GNAO1P09471 354 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 TPSB2P20231 275 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 ALDH1B1P30837 517 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 GARSP41250 739 aaKnown RBP16.18■□□□□ 0.18
CKAP4-201ENST00000378026 MAGEA6P43360 314 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 ITGA7Q13683 1181 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 TPSAB1Q15661 275 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 Q3C1V9 767 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 HERC6Q8IVU3 1022 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 SCUBE3Q8IX30 993 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 FIBCD1Q8N539 461 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 C12orf29Q8N999 325 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 RDM1Q8NG50 284 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 DLG3Q92796 817 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 SLC38A10Q9HBR0 1119 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 BTAF1O14981 1849 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 DOCK5Q9H7D0 1870 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 SAC3D1A6NKF1 404 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 HDAC3O15379 428 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 TIPRLO75663 272 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 ATE1O95260 518 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 OCM2P0CE71 109 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 OCMP0CE72 109 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms