RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 HM13Q8TCT9 377 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 DENND1AQ8TEH3 1009 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 CHID1Q9BWS9 393 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 EPB41L4BQ9H329 900 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 COQ10BQ9H8M1 238 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 COMMD8Q9NX08 183 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 USE1Q9NZ43 259 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 VAV3Q9UKW4 847 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 C3P01024 1663 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 SUPT3HB4E1H0 165 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 E5RI56 91 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 ANXA9O76027 345 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 PDGFRBP09619 1106 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 CDK9P50750 372 aaKnown RBP9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 EPS8Q12929 822 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 KCTD2Q14681 263 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 ANKRD23Q86SG2 305 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 FAM131BQ86XD5 332 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 SYTL1Q8IYJ3 562 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 HPS4Q9NQG7 708 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 TMED5Q9Y3A6 229 aa9.23□□□□□ -0.93
CRNKL1-201ENST00000377327 CLDN25C9JDP6 229 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 RNF103O00237 685 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 TNPO2O14787 897 aaKnown RBP9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 SNPHO15079 494 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 PLIN3O60664 434 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 KLRC2P26717 231 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 DSG3P32926 999 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 SLC7A2P52569 658 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 MSLNQ13421 630 aaPredicted RBP9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 ITGA7Q13683 1181 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 DGCR6Q14129 220 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 SQLEQ14534 574 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 DEPDC1Q5TB30 811 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 AKAP14Q86UN6 197 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 ZNF410Q86VK4 478 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 MIER2Q8N344 545 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 ATPAF2Q8N5M1 289 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 PDPRQ8NCN5 879 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 BPIFB6Q8NFQ5 453 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 DCAKDQ8WVC6 231 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 LPGAT1Q92604 370 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 VPS33AQ96AX1 596 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 TAMM41Q96BW9 452 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 PPP1R2P1Q96PQ5 205 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 SNX15Q9NRS6 342 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 MTF2Q9Y483 593 aaPredicted RBP9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 ADGRA2Q96PE1 1338 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 MYH7BA7E2Y1 1941 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 TRUB2O95900 331 aaKnown RBP9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 GM2AP17900 193 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 RAP1GAPP47736 663 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 ATP6AP1LQ52LC2 224 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 TREML1Q86YW5 311 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 ANKRD13AQ8IZ07 590 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 UBR7Q8N806 425 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 ZNF280CQ8ND82 737 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 FNDC8Q8TC99 324 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 ACER1Q8TDN7 264 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 OLFM1Q99784 485 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 EGFL8Q99944 293 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 WDR18Q9BV38 432 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 TLE6Q9H808 572 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 LIN28AQ9H9Z2 209 aaKnown RBP9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 BTBD3Q9Y2F9 522 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 TELO2Q9Y4R8 837 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 CCNT2O60583 730 aaKnown RBP9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 CABYRO75952 493 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 NADKO95544 446 aaPredicted RBP9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 ICAM1P05362 532 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 ADSLP30566 484 aaPredicted RBP9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 ENTPD1P49961 510 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 LSM3P62310 102 aaKnown RBP9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 YWHAZP63104 245 aaKnown RBP9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 TNK2Q07912 1038 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 CSTF3Q12996 717 aaKnown RBP9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 TOP3AQ13472 1001 aaPredicted RBP9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 ZNF829Q3KNS6 432 aaPredicted RBP9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 ZBED5Q49AG3 693 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 IER5Q5VY09 327 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 LIPMQ5VYY2 423 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 TDRD10Q5VZ19 366 aaKnown RBP9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 RNF19BQ6ZMZ0 732 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 PIWIL4Q7Z3Z4 852 aaKnown RBP9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 CMC1Q7Z7K0 106 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 SNX31Q8N9S9 440 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 SETD9Q8NE22 299 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 GPRASP2Q96D09 838 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 SPATA17Q96L03 361 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 MFSD14AQ96MC6 490 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 APBA2Q99767 749 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 PPME1Q9Y570 386 aa9.22□□□□□ -0.93
CRNKL1-201ENST00000377327 A0A0J9YVX5 310 aa9.21□□□□□ -0.93
CRNKL1-201ENST00000377327 M0QZ92 97 aa9.21□□□□□ -0.93
CRNKL1-201ENST00000377327 VWA5AO00534 786 aa9.21□□□□□ -0.93
CRNKL1-201ENST00000377327 UGT1A9O60656 530 aa9.21□□□□□ -0.93
CRNKL1-201ENST00000377327 PPP1R11O60927 126 aaPredicted RBP9.21□□□□□ -0.93
CRNKL1-201ENST00000377327 PMPCBO75439 489 aa9.21□□□□□ -0.93
CRNKL1-201ENST00000377327 CAPN1P07384 714 aa9.21□□□□□ -0.93
CRNKL1-201ENST00000377327 UGT1A6P19224 532 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms