RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 SNIP1Q8TAD8 396 aaKnown RBP13.59□□□□□ -0.23
CLCN6-205ENST00000376492 TTC17Q96AE7 1141 aa13.59□□□□□ -0.23
CLCN6-205ENST00000376492 SERAC1Q96JX3 654 aa13.59□□□□□ -0.23
CLCN6-205ENST00000376492 NRSN2Q9GZP1 204 aa13.59□□□□□ -0.23
CLCN6-205ENST00000376492 KIAA1257Q9ULG3 409 aa13.59□□□□□ -0.23
CLCN6-205ENST00000376492 SCML1Q9UN30 329 aa13.59□□□□□ -0.23
CLCN6-205ENST00000376492 LRRC72A6NJI9 287 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 RNASEH1O60930 286 aaKnown RBP13.58□□□□□ -0.24
CLCN6-205ENST00000376492 GABBR2O75899 941 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 C1SP09871 688 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 LCP1P13796 627 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 PRKCSHP14314 528 aaPredicted RBP13.58□□□□□ -0.24
CLCN6-205ENST00000376492 CD19P15391 556 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 SLC8A1P32418 973 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 MTIF2P46199 727 aaKnown RBP13.58□□□□□ -0.24
CLCN6-205ENST00000376492 NUMBP49757 651 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 ADPRHP54922 357 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 DAOAP59103 153 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 ST8SIA6P61647 398 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 RPS24P62847 133 aaKnown RBP13.58□□□□□ -0.24
CLCN6-205ENST00000376492 CCDC173Q0VFZ6 552 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 BST2Q10589 180 aaKnown RBP13.58□□□□□ -0.24
CLCN6-205ENST00000376492 MAN2A1Q16706 1144 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 FSCBQ5H9T9 825 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 MPP7Q5T2T1 576 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 SFMBT2Q5VUG0 894 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 MSANTD2Q6P1R3 559 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 KANSL1Q7Z3B3 1105 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 PPM1KQ8N3J5 372 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 BAP1Q92560 729 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 SKA1Q96BD8 255 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 OMDQ99983 421 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 INTS2Q9H0H0 1204 aaKnown RBP13.58□□□□□ -0.24
CLCN6-205ENST00000376492 ABCC13Q9NSE7 274 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 ADAMTS1Q9UHI8 967 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 FZD4Q9ULV1 537 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 MGAQ8IWI9 3026 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 KNTC1P50748 2209 aa13.58□□□□□ -0.24
CLCN6-205ENST00000376492 GOLGA6L3A6NEY3 463 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 TLR4O00206 839 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 YKT6O15498 198 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 ACSL4O60488 711 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 PAEPP09466 180 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 VDRP11473 427 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 CDK4P11802 303 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 SLC11A2P49281 568 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 ARRB1P49407 418 aaPredicted RBP13.57□□□□□ -0.24
CLCN6-205ENST00000376492 RGS7P49802 495 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 CCR5P51681 352 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 METAP1P53582 386 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 TLE3Q04726 772 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 VWA3BQ502W6 1294 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 SGO2Q562F6 1265 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 PITRM1Q5JRX3 1037 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 SMYD5Q6GMV2 418 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 GBP6Q6ZN66 633 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 RRAGAQ7L523 313 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 GPR155Q7Z3F1 870 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 ZNF605Q86T29 641 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 ERICH1Q86X53 443 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 SPATS2Q86XZ4 545 aaKnown RBP13.57□□□□□ -0.24
CLCN6-205ENST00000376492 ARHGEF19Q8IW93 802 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 SPACA3Q8IXA5 215 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 CFAP52Q8N1V2 620 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 STK40Q8N2I9 435 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 CARNMT1Q8N4J0 409 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 HJURPQ8NCD3 748 aaPredicted RBP13.57□□□□□ -0.24
CLCN6-205ENST00000376492 OR14C36Q8NHC7 312 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 FIBINQ8TAL6 211 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 CLEC4CQ8WTT0 213 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 FGF11Q92914 225 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 KAT5Q92993 513 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 FAM81BQ96LP2 452 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 KREMEN1Q96MU8 473 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 FAM129BQ96TA1 746 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 TUBGCP2Q9BSJ2 902 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 NUCKS1Q9H1E3 243 aaKnown RBP13.57□□□□□ -0.24
CLCN6-205ENST00000376492 SAMSN1Q9NSI8 373 aaKnown RBP13.57□□□□□ -0.24
CLCN6-205ENST00000376492 HESX1Q9UBX0 185 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 CNTN6Q9UQ52 1028 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 ERVW-1Q9UQF0 538 aa13.57□□□□□ -0.24
CLCN6-205ENST00000376492 TP53BP1Q12888 1972 aaPredicted RBP13.56□□□□□ -0.24
CLCN6-205ENST00000376492 MAST4O15021 2626 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 RNF225M0QZC1 329 aaPredicted RBP13.56□□□□□ -0.24
CLCN6-205ENST00000376492 O00370 1275 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 IRAK2O43187 625 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 SDC3O75056 442 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 ASLP04424 464 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 VAV1P15498 845 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 GOT1P17174 413 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 SLC9A1P19634 815 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 GLDCP23378 1020 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 EEF1GP26641 437 aaKnown RBP13.56□□□□□ -0.24
CLCN6-205ENST00000376492 PON1P27169 355 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 TBX4P57082 545 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 CXADRP78310 365 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 INSM1Q01101 510 aaPredicted RBP13.56□□□□□ -0.24
CLCN6-205ENST00000376492 CDH18Q13634 790 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 ARID5BQ14865 1188 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 EXOC3L4Q17RC7 722 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms