RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 CNTN1Q12860 1018 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 USP50Q70EL3 339 aaPredicted RBP10.81□□□□□ -0.68
PGK1-201ENST00000373316 PIWIL4Q7Z3Z4 852 aaKnown RBP10.81□□□□□ -0.68
PGK1-201ENST00000373316 CENPLQ8N0S6 344 aaPredicted RBP10.81□□□□□ -0.68
PGK1-201ENST00000373316 HDAC7Q8WUI4 952 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 DACT3Q96B18 629 aaPredicted RBP10.81□□□□□ -0.68
PGK1-201ENST00000373316 CATSPER2Q96P56 530 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 CCDC90BQ9GZT6 254 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.81□□□□□ -0.681e-7■■■■□ 25.6
PGK1-201ENST00000373316 LRMDAQ9H2I8 198 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 WWOXQ9NZC7 414 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 CRLS1Q9UJA2 301 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 ZNF214Q9UL59 606 aaPredicted RBP10.81□□□□□ -0.68
PGK1-201ENST00000373316 CORO2BQ9UQ03 480 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 PCDHB5Q9Y5E4 795 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 TRPV2Q9Y5S1 764 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 A0A087WXM4 84 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 H3BRB1 525 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 KPNA5O15131 536 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 RAD51BO15315 384 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 ASS1P00966 412 aaKnown RBP10.81□□□□□ -0.68
PGK1-201ENST00000373316 SERPINF2P08697 491 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 SOX6P35712 828 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 BRMS1LQ5PSV4 323 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 MARC1Q5VT66 337 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 LRRC57Q8N9N7 239 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 SNX31Q8N9S9 440 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 IRGQQ8WZA9 623 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 C7orf26Q96N11 449 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 ACO2Q99798 780 aaKnown RBP10.81□□□□□ -0.68
PGK1-201ENST00000373316 TUT1Q9H6E5 874 aaKnown RBP10.81□□□□□ -0.68
PGK1-201ENST00000373316 ADAM30Q9UKF2 790 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.81□□□□□ -0.68
PGK1-201ENST00000373316 MANSC4A6NHS7 340 aaPredicted RBP10.81□□□□□ -0.68
PGK1-201ENST00000373316 TGFB1I1O43294 461 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 RPL3P39023 403 aaKnown RBP10.81□□□□□ -0.68
PGK1-201ENST00000373316 TP53BP2Q13625 1128 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 CYTH1Q15438 398 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 C10orf120Q5SQS8 335 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 GJC2Q5T442 439 aaPredicted RBP10.81□□□□□ -0.68
PGK1-201ENST00000373316 SNX30Q5VWJ9 437 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 PKN3Q6P5Z2 889 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.81□□□□□ -0.68
PGK1-201ENST00000373316 ANKRD52Q8NB46 1076 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 SLC4A11Q8NBS3 891 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 CLPBQ9H078 707 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 ADNPQ9H2P0 1102 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 CD248Q9HCU0 757 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 EIF2B3Q9NR50 452 aaKnown RBP10.81□□□□□ -0.68
PGK1-201ENST00000373316 MARCOQ9UEW3 520 aaPredicted RBP10.81□□□□□ -0.68
PGK1-201ENST00000373316 CDC26Q8NHZ8 85 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 TUBGCP3Q96CW5 907 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 PANX3Q96QZ0 392 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 DMAC2Q9NW81 257 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 TAS2R13Q9NYV9 303 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 AHSPQ9NZD4 102 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 SELENONQ9NZV5 590 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 SLC25A13Q9UJS0 675 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 ABT1Q9ULW3 272 aaKnown RBP10.81□□□□□ -0.68
PGK1-201ENST00000373316 SATB2Q9UPW6 733 aa10.81□□□□□ -0.68
PGK1-201ENST00000373316 DNAJA2O60884 412 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 LRRC8DQ7L1W4 858 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 TRABD2AQ86V40 505 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 MIER2Q8N344 545 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 CYGBQ8WWM9 190 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 TLCD1Q96CP7 247 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 FICDQ9BVA6 458 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 BCLAF3A2AJT9 711 aaKnown RBP10.8□□□□□ -0.68
PGK1-201ENST00000373316 SUPT7LO94864 414 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 TRPC1P48995 793 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 TGM3Q08188 693 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 NFYCQ13952 458 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 ANKS6Q68DC2 871 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 RETSATQ6NUM9 610 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 POTEHQ6S545 545 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 DHFR2Q86XF0 187 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 SH3KBP1Q96B97 665 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 EBNA1BP2Q99848 306 aaKnown RBP10.8□□□□□ -0.68
PGK1-201ENST00000373316 MRPS26Q9BYN8 205 aaKnown RBP10.8□□□□□ -0.68
PGK1-201ENST00000373316 OSBPL6Q9BZF3 934 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 COQ4Q9Y3A0 265 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 RAP2CQ9Y3L5 183 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 TMEM191CA6NGB0 347 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 LACTBL1A8MY62 500 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 AHCYL1O43865 530 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 EDF1O60869 148 aaKnown RBP10.8□□□□□ -0.68
PGK1-201ENST00000373316 CXCL8P10145 99 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 ZNF7P17097 686 aaPredicted RBP10.8□□□□□ -0.68
PGK1-201ENST00000373316 ATP4AP20648 1035 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 GLRA2P23416 452 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 ATP5F1P24539 256 aaPredicted RBP10.8□□□□□ -0.68
PGK1-201ENST00000373316 PSMA3P25788 255 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 ATP6V0D1P61421 351 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 DPYSQ14117 519 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 TTC27Q6P3X3 843 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.8□□□□□ -0.683e-6■■■■□ 21.3
PGK1-201ENST00000373316 ARRDC4Q8NCT1 418 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 SEPT8Q92599 483 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 FBXO32Q969P5 355 aa10.8□□□□□ -0.68
PGK1-201ENST00000373316 ZNF512Q96ME7 567 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms