RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 GSNP06396 782 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 SSTP61278 116 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 SLC6A3Q01959 620 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 SGCGQ13326 291 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 C16orf72Q14CZ0 275 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 TBRG1Q3YBR2 411 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 FNDC3BQ53EP0 1204 aaKnown RBP13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 AGAP9Q5VTM2 703 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 BBS2Q9BXC9 721 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 KCND1Q9NSA2 647 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 DNAJC11Q9NVH1 559 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 BTBD7Q9P203 1132 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 NCKAP1Q9Y2A7 1128 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 LRCH1Q9Y2L9 728 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 RPS6KL1Q9Y6S9 549 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 LTN1O94822 1766 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 TRAV19A0A0A6YYK7 116 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 KPNA4O00629 521 aaPredicted RBP13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 VPS26AO75436 327 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 PPM1AP35813 382 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 MARC1Q5VT66 337 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 IYDQ6PHW0 289 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 UNC93AQ86WB7 457 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 ABHD8Q96I13 439 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 SASH3O75995 380 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 GTF2BQ00403 316 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 POU4F1Q01851 419 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 CCNG2Q16589 344 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 C11orf63Q6NUN7 778 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 LLGL2Q6P1M3 1020 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 DSG4Q86SJ6 1040 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 TRAPPC9Q96Q05 1148 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 BTBD10Q9BSF8 475 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 POPDC2Q9HBU9 364 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 HES2Q9Y543 173 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 ARIH2O95376 493 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 TFE3P19532 575 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 SOX6P35712 828 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 PRKG2Q13237 762 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 DGKKQ5KSL6 1271 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 SLC26A11Q86WA9 606 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 LRRN4CLQ8ND94 238 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 UPF1Q92900 1129 aaKnown RBP eCLIP13.56□□□□□ -0.243e-8■■■■■ 29.1
RAPGEF1-201ENST00000372189 PLEKHA8Q96JA3 519 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 MNTQ99583 582 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 CLPBQ9H078 707 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 GDF3Q9NR23 364 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 ASAH2Q9NR71 780 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 CUEDC1Q9NWM3 386 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 NFKBIL1Q9UBC1 381 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 TIMM44O43615 452 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 ADH1AP07327 375 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 FAM58BPP0C7Q3 252 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 ZNF23P17027 643 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 PAX7P23759 505 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 RPL9P32969 192 aaKnown RBP13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 SEL1L3Q68CR1 1132 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 PDPK2PQ6A1A2 396 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 TMPRSS6Q8IU80 811 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 DEFB106AQ8N104 65 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 TBCBQ99426 244 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 H2AFY2Q9P0M6 372 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 SFMBT1Q9UHJ3 866 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 A0A087X0B3 334 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 SMIM35A0A1B0GVV1 85 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 EVX2Q03828 476 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 PRKCQQ04759 706 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 LRRC74AQ0VAA2 488 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 NFYCQ13952 458 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 LBX2Q6XYB7 198 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 ZNF557Q8N988 423 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 HES6Q96HZ4 224 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 CELF6Q96J87 481 aaKnown RBP13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 OSBPL10Q9BXB5 764 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 KRT84Q9NSB2 600 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 FKBP14Q9NWM8 211 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 CDH9Q9ULB4 789 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 SAC3D1A6NKF1 404 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 SLC9A3R1O14745 358 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 NFICP08651 508 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 BGNP21810 368 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 TBX2Q13207 712 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 SPDYCQ5MJ68 293 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 VCPIP1Q96JH7 1222 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 EPS8L2Q9H6S3 715 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 RABGEF1Q9UJ41 708 aa13.56□□□□□ -0.24
RAPGEF1-201ENST00000372189 SPTLC1O15269 473 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 TPST1O60507 370 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 B3GALNT1O75752 331 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 FGRP09769 529 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 OCM2P0CE71 109 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 OCMP0CE72 109 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 ITGB5P18084 799 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 PEX5P50542 639 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 VBP1P61758 197 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 ZNF844Q08AG5 666 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 SGO1Q5FBB7 561 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 TMC3Q7Z5M5 1100 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 LPCAT1Q8NF37 534 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 LRRC40Q9H9A6 602 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms