RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 CD86P42081 329 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 RAPSNQ13702 412 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 TAF2Q6P1X5 1199 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 PARGQ86W56 976 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 COPS5Q92905 334 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 VPS33AQ96AX1 596 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 PCDH12Q9NPG4 1184 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 TMPRSS4Q9NRS4 437 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 RAD54BQ9Y620 910 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 NEXMIFQ5QGS0 1516 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 IGSF6O95976 241 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 TSPAN19P0C672 248 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 DLG4P78352 724 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 MGAT5Q09328 741 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 FAAP100Q0VG06 881 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 FBXL19Q6PCT2 694 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 STK32CQ86UX6 486 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 PCDH20Q8N6Y1 951 aaKnown RBP18.48■□□□□ 0.55
SNX27-202ENST00000368841 GPR156Q8NFN8 814 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 CORO1BQ9BR76 489 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 C17orf75Q9HAS0 396 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 ELL3Q9HB65 397 aaPredicted RBP18.48■□□□□ 0.55
SNX27-202ENST00000368841 ADAM30Q9UKF2 790 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 PAICSP22234 425 aaKnown RBP18.48■□□□□ 0.55
SNX27-202ENST00000368841 CCL23P55773 120 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 GPAT3Q53EU6 434 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 FAM45BPQ6NSW5 357 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 KLHL28Q9NXS3 571 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 INVSQ9Y283 1065 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 TMEM114B3SHH9 223 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 E5RJQ4 531 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 ATP6V1G2O95670 118 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 ANKRD7Q92527 254 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 ARL15Q9NXU5 204 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 HK2P52789 917 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 CRY1Q16526 586 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 EARS2Q5JPH6 523 aaKnown RBP18.48■□□□□ 0.55
SNX27-202ENST00000368841 DHFR2Q86XF0 187 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 ARHGAP20Q9P2F6 1191 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 UNC13BO14795 1591 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 NAT16Q8N8M0 369 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 DAGLBQ8NCG7 672 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 BTRCQ9Y297 605 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 ZNF839A8K0R7 811 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 ANKRD63C9JTQ0 380 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 KRT33AO76009 404 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 PIRTP0C851 137 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 PGAM1P18669 254 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 IFI35P80217 286 aaPredicted RBP18.47■□□□□ 0.55
SNX27-202ENST00000368841 SPIDRQ14159 915 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 KIAA0895Q8NCT3 520 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 CDCA5Q96FF9 252 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 CATSPERZQ9NTU4 200 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 KLQ9UEF7 1012 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 LOC100506127A0A0U1RQW1 187 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 DDX3XO00571 662 aaKnown RBP eCLIP18.47■□□□□ 0.559e-14■■■■□ 25.7
SNX27-202ENST00000368841 MYL12BO14950 172 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 CTPS1P17812 591 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 FASP25445 335 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 ALDH5A1P51649 535 aaPredicted RBP18.47■□□□□ 0.55
SNX27-202ENST00000368841 GALNT3Q14435 633 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 PFKFB4Q16877 469 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 XRRA1Q6P2D8 792 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 C3orf20Q8ND61 904 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 TM6SF2Q9BZW4 377 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 GRIP2Q9C0E4 1043 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 ACP6Q9NPH0 428 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 A0A096LPK6 155 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 ACADSP16219 412 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 ERCC2P18074 760 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 RFX5P48382 616 aaPredicted RBP18.47■□□□□ 0.55
SNX27-202ENST00000368841 MRPS35P82673 323 aaKnown RBP18.47■□□□□ 0.55
SNX27-202ENST00000368841 PROSER1Q86XN7 944 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 CD302Q8IX05 232 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 TMEM132CQ8N3T6 1108 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 OR10G6Q8NH81 332 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 MYLK2Q9H1R3 596 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 ARMC7Q9H6L4 198 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 CROTQ9UKG9 612 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 SMIM22K7EJ46 135 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 AMD1P17707 334 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 TCEA1P23193 301 aaKnown RBP18.47■□□□□ 0.55
SNX27-202ENST00000368841 TROAPQ12815 778 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 COLGALT2Q8IYK4 626 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 DTNBP1Q96EV8 351 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 COQ7Q99807 217 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 PTPN3P26045 913 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 PSMB4P28070 264 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 PTPAQ15257 358 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 BHLHE22Q8NFJ8 381 aaPredicted RBP18.47■□□□□ 0.55
SNX27-202ENST00000368841 OR6Y1Q8NGX8 325 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 PYDC1Q8WXC3 89 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 NSMCE2Q96MF7 247 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 LACRTQ9GZZ8 138 aa18.47■□□□□ 0.55
SNX27-202ENST00000368841 DCXO43602 365 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 IDH3BO43837 385 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 CBX6O95503 412 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 ZIK1Q3SY52 487 aaPredicted RBP18.46■□□□□ 0.55
SNX27-202ENST00000368841 METTL7BQ6UX53 244 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 ABRAQ8N0Z2 381 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms