RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 SEPT8Q92599 483 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 MS4A14Q96JA4 679 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 BTBD6Q96KE9 485 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 MCEEQ96PE7 176 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 SARGQ9BW04 601 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 TMEM161AQ9NX61 479 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 KCNK4Q9NYG8 393 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 CYTH4Q9UIA0 394 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 PCDHA3Q9Y5H8 950 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 MICAL3Q7RTP6 2002 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 ZDBF2Q9HCK1 2354 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 SIGLEC16A6NMB1 481 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 K7ESF4 209 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 NBNO60934 754 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 POMCP01189 267 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 PF4V1P10720 104 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 HOXB8P17481 243 aaPredicted RBP9.11□□□□□ -0.95
TPM3-213ENST00000368545 AOC1P19801 751 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 HOXC12P31275 282 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 ECI1P42126 302 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 SLC8A3P57103 927 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 PSMC1P62191 440 aaKnown RBP9.11□□□□□ -0.95
TPM3-213ENST00000368545 UBE3AQ05086 875 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 CYP4A22Q5TCH4 519 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 DCAF12L1Q5VU92 463 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 XYLT1Q86Y38 959 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 ZDHHC17Q8IUH5 632 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 RHOT1Q8IXI2 618 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 C12orf29Q8N999 325 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 ANKRD52Q8NB46 1076 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 B3GALNT2Q8NCR0 500 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 ALG3Q92685 438 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 E2F7Q96AV8 911 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 MCRS1Q96EZ8 462 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 TCF7L1Q9HCS4 588 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 FAM49BQ9NUQ9 324 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 TMEM59LQ9UK28 342 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 SCN5AQ14524 2016 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 A0A0C4DFX4 3053 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 MYO9BQ13459 2157 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 GOLGA6L10A0A0M3HER8 536 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 TMEM189-UBE2V1I3L0A0 370 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 CBX4O00257 560 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 B3GAT3O94766 335 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 SNUPNO95149 360 aaKnown RBP9.1□□□□□ -0.95
TPM3-213ENST00000368545 ERBB2P04626 1255 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 KRT3P12035 628 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 PCSK1P29120 753 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 ACADSBP45954 432 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 PEX5P50542 639 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 ZRSR2Q15696 482 aaKnown RBP9.1□□□□□ -0.95
TPM3-213ENST00000368545 ATP13A4Q4VNC1 1196 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 NOMO2Q5JPE7 1267 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 WSCD1Q658N2 575 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 C8orf86Q6ZUL3 223 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 MTERF4Q7Z6M4 381 aaKnown RBP9.1□□□□□ -0.95
TPM3-213ENST00000368545 RTN4RL1Q86UN2 441 aaPredicted RBP9.1□□□□□ -0.95
TPM3-213ENST00000368545 TTC30AQ86WT1 665 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 METTL23Q86XA0 190 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 KIF18BQ86Y91 864 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 WFDC8Q8IUA0 241 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 KIAA2013Q8IYS2 634 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 ZDHHC14Q8IZN3 488 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 FIBCD1Q8N539 461 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 TMEM105Q8N8V8 129 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 PJA1Q8NG27 643 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 KRT35Q92764 455 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 TRIM7Q9C029 511 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 DPEP3Q9H4B8 488 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 ANKZF1Q9H8Y5 726 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 EHD2Q9NZN4 543 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 NME7Q9Y5B8 376 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 KMT2BQ9UMN6 2715 aaPredicted RBP9.1□□□□□ -0.95
TPM3-213ENST00000368545 UNC80Q8N2C7 3258 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 TTC3P53804 2025 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 PTPRSQ13332 1948 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 CCDC151A5D8V7 595 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 M0QZQ0 153 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 LRP3O75074 770 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 FGGP02679 453 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 PROS1P07225 676 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 RHOXF2BP0C7M4 288 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 H2AFXP16104 143 aaPredicted RBP9.1□□□□□ -0.95
TPM3-213ENST00000368545 DESP17661 470 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 ALAS2P22557 587 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 CCND1P24385 295 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 LMO2P25791 158 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 BMPR1AP36894 532 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 MAGEA9P43362 315 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 RPL7AP62424 266 aaKnown RBP9.1□□□□□ -0.95
TPM3-213ENST00000368545 GUCY1A3Q02108 690 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 DSC1Q08554 894 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 PCBP2Q15366 365 aaKnown RBP eCLIP9.1□□□□□ -0.952e-8■■■□□ 17.3
TPM3-213ENST00000368545 ANGPT1Q15389 498 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 ZNF528Q3MIS6 628 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 MINDY4Q4G0A6 757 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 LRRC38Q5VT99 294 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 C8orf74Q6P047 294 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 WDR93Q6P2C0 686 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 DCLRE1AQ6PJP8 1040 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms