RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 H3BNH8 94 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 NOL3O60936 208 aaKnown RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 SORBS2O94875 1100 aaKnown RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 YBX3P16989 372 aaKnown RBP eCLIP9.28□□□□□ -0.922e-7■■□□□ 13.1
SMYD3-201ENST00000366516 XRCC1P18887 633 aaPredicted RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 CYP2F1P24903 491 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 GPD2P43304 727 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 LIMK2P53671 638 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 NRLP54845 237 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 CSE1LP55060 971 aaKnown RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 PHEXP78562 749 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 STX5Q13190 355 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 MTMR2Q13614 643 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 MXD4Q14582 209 aaPredicted RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 PPP2R5DQ14738 602 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 DPYSL2Q16555 572 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 LIPMQ5VYY2 423 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 CYP4V2Q6ZWL3 525 aaPredicted RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 AMIGO2Q86SJ2 522 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 CARM1Q86X55 608 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 ZNF354CQ86Y25 554 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 ZNF781Q8N8C0 355 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 TMEM102Q8N9M5 508 aaPredicted RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 PCDH19Q8TAB3 1148 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 CERS2Q96G23 380 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 DUS3LQ96G46 650 aaKnown RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 FAM167AQ96KS9 214 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 SPATA13Q96N96 652 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 MPHOSPH6Q99547 160 aaKnown RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 RBBP8Q99708 897 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 PKP2Q99959 881 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 SLC4A5Q9BY07 1137 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 ANKRD60Q9BZ19 345 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 IL22Q9GZX6 179 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 UPF3AQ9H1J1 476 aaKnown RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 ZBTB26Q9HCK0 441 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 TMEM216Q9P0N5 145 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 NXF1Q9UBU9 619 aaKnown RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 ZNF70Q9UC06 446 aaPredicted RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 H3BSA7 217 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 AP3B1O00203 1094 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 NOP56O00567 594 aaKnown RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 CILPO75339 1184 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 METTL18O95568 372 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 HOXC6P09630 235 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 HSPA1AP0DMV8 641 aaKnown RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 HSPA1BP0DMV9 641 aaKnown RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 C7P10643 843 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 HSPA8P11142 646 aaKnown RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 ENO3P13929 434 aaPredicted RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 ZNF26P17031 533 aaPredicted RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 PHKA2P46019 1235 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 CAPSQ13938 189 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 CYTH1Q15438 398 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 ZBED5Q49AG3 693 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 SLC9B1Q4ZJI4 515 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 VWA5B1Q5TIE3 1220 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 FAM160B1Q5W0V3 765 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 SCARA3Q6AZY7 606 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 OR6B2Q6IFH4 312 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 MPZL3Q6UWV2 235 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 COLGALT2Q8IYK4 626 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 MPP5Q8N3R9 675 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 SHKBP1Q8TBC3 707 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 HTR3CQ8WXA8 447 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 FAR2Q96K12 515 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 MMP19Q99542 508 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 TMEM79Q9BSE2 394 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 TRIM15Q9C019 465 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 LRRC40Q9H9A6 602 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 NMRAL1Q9HBL8 299 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 NGRNQ9NPE2 291 aaKnown RBP9.28□□□□□ -0.92
SMYD3-201ENST00000366516 RNF146Q9NTX7 359 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 GTF2IRD1Q9UHL9 959 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 CDH7Q9ULB5 785 aa9.28□□□□□ -0.92
SMYD3-201ENST00000366516 TMEM221A6NGB7 291 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 SPATA31C2B4DYI2 1134 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 ACOT8O14734 319 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 MSCO60682 206 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 CABYRO75952 493 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 VAPBO95292 243 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 IL4RP24394 825 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 PCSK6P29122 969 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 SCNN1AP37088 669 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 POLD2P49005 469 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 KPNA2P52292 529 aaKnown RBP9.27□□□□□ -0.93
SMYD3-201ENST00000366516 RHDQ02161 417 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 BAATQ14032 418 aaPredicted RBP9.27□□□□□ -0.93
SMYD3-201ENST00000366516 TRIM25Q14258 630 aaKnown RBP9.27□□□□□ -0.93
SMYD3-201ENST00000366516 KYAT1Q16773 422 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 CDO1Q16878 200 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 ZNF829Q3KNS6 432 aaPredicted RBP9.27□□□□□ -0.93
SMYD3-201ENST00000366516 IER5Q5VY09 327 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 GRAMD4Q6IC98 578 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 STYK1Q6J9G0 422 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 SCYL2Q6P3W7 929 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 GALNT4Q8N4A0 578 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 GOLM1Q8NBJ4 401 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 DDHD1Q8NEL9 900 aa9.27□□□□□ -0.93
SMYD3-201ENST00000366516 SLC7A14Q8TBB6 771 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms