RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 GALNT3Q14435 633 aa2.39□□□□□ -2.03
RNU6-238P-201ENST00000363313 CNN3Q15417 329 aaKnown RBP2.39□□□□□ -2.03
RNU6-238P-201ENST00000363313 PLEKHO1Q53GL0 409 aaPredicted RBP2.39□□□□□ -2.03
RNU6-238P-201ENST00000363313 AAGABQ6PD74 315 aa2.39□□□□□ -2.03
RNU6-238P-201ENST00000363313 C9orf139Q6ZV77 190 aa2.39□□□□□ -2.03
RNU6-238P-201ENST00000363313 RNF44Q7L0R7 432 aa2.39□□□□□ -2.03
RNU6-238P-201ENST00000363313 LYG1Q8N1E2 194 aa2.39□□□□□ -2.03
RNU6-238P-201ENST00000363313 ADGRG7Q96K78 797 aa2.39□□□□□ -2.03
RNU6-238P-201ENST00000363313 IL17FQ96PD4 163 aa2.39□□□□□ -2.03
RNU6-238P-201ENST00000363313 EIF3CQ99613 913 aaKnown RBP2.39□□□□□ -2.03
RNU6-238P-201ENST00000363313 KLHL31Q9H511 634 aa2.39□□□□□ -2.03
RNU6-238P-201ENST00000363313 GAREM1Q9H706 876 aa2.39□□□□□ -2.03
RNU6-238P-201ENST00000363313 ZNF287Q9HBT7 754 aa2.39□□□□□ -2.03
RNU6-238P-201ENST00000363313 KCNK9Q9NPC2 374 aa2.39□□□□□ -2.03
RNU6-238P-201ENST00000363313 AASDHPPTQ9NRN7 309 aa2.39□□□□□ -2.03
RNU6-238P-201ENST00000363313 TMEM248Q9NWD8 314 aa2.39□□□□□ -2.03
RNU6-238P-201ENST00000363313 AGO1Q9UL18 857 aaKnown RBP2.39□□□□□ -2.03
RNU6-238P-201ENST00000363313 UBE2J1Q9Y385 318 aaPredicted RBP2.39□□□□□ -2.03
RNU6-238P-201ENST00000363313 IGLV5-37A0A075B6J1 123 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 TRBV5-7A0A0A0MS05 114 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 FAM72CH0Y354 149 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 AREL1O15033 823 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 CTNND1O60716 968 aaKnown RBP2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 TBX6O95947 436 aaPredicted RBP2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 APOHP02749 345 aaPredicted RBP2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 ANXA2P07355 339 aaKnown RBP2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 CFC1BP0CG36 223 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 CFC1P0CG37 223 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 U2AF1L5P0DN76 240 aaPredicted RBP2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 MYF5P13349 255 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 NAGAP17050 411 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 ATICP31939 592 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 TNFSF8P32971 234 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 PEX5P50542 639 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 PMS2P54278 862 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 EVA1CP58658 441 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 U2AF1Q01081 240 aaKnown RBP eCLIP2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 NSUN2Q08J23 767 aaKnown RBP eCLIP2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 GRSF1Q12849 480 aaKnown RBP eCLIP2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 SNTA1Q13424 505 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 ATP1A4Q13733 1029 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 KRT72Q14CN4 511 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 POLD3Q15054 466 aaPredicted RBP2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 FAXCQ5TGI0 409 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 VWA5B1Q5TIE3 1220 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 FAM72AQ5TYM5 149 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 ZNF772Q68DY9 489 aaPredicted RBP2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 FAM72DQ6L9T8 149 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 MRNIPQ6NTE8 343 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 WDR93Q6P2C0 686 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 TRMT1LQ7Z2T5 733 aaKnown RBP2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 FAM72BQ86X60 149 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 ZBTB34Q8NCN2 500 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 HOOK2Q96ED9 719 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 BICD1Q96G01 975 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 SNX22Q96L94 193 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 PAAF1Q9BRP4 392 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 TRMT61BQ9BVS5 477 aaKnown RBP2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 SLC45A1Q9Y2W3 748 aa2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 SRPRBQ9Y5M8 271 aaKnown RBP2.38□□□□□ -2.03
RNU6-238P-201ENST00000363313 SAA2-SAA4A0A096LPE2 208 aa2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 IGHV4-28A0A0C4DH34 117 aa2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 GXYLT2A0PJZ3 443 aa2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 C3orf70A6NLC5 250 aaPredicted RBP2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 STMND1H3BQB6 276 aa2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 TULP2O00295 520 aa2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 RFPL1O75677 317 aa2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 SERPINI2O75830 405 aa2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 PHEXP78562 749 aa2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 HDAC1Q13547 482 aaPredicted RBP2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 PIK3AP1Q6ZUJ8 805 aa2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 SESTD1Q86VW0 696 aa2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 ANKRD44Q8N8A2 993 aa2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 ANKRD9Q96BM1 317 aaPredicted RBP2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 FAR2Q96K12 515 aa2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 RHOBTB2Q9BYZ6 727 aa2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 UBTD1Q9HAC8 227 aa2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 HOMER2Q9NSB8 354 aa2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 OCIAD1Q9NX40 245 aa2.37□□□□□ -2.03
RNU6-238P-201ENST00000363313 IGKV3D-15A0A087WSY6 115 aa2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 A0A0U1RQJ8 604 aa2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 CLCA1A8K7I4 914 aa2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 ZSCAN9O15535 394 aaPredicted RBP2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 ALADP13716 330 aa2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 YY1P25490 414 aa2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 AVPR1AP37288 418 aa2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 ATP12AP54707 1039 aa2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 RBM6P78332 1123 aaKnown RBP2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 BNC1Q01954 994 aa2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 HNF4GQ14541 408 aa2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 BRDTQ58F21 947 aaPredicted RBP2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 BSPRYQ5W0U4 402 aa2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 HEPHL1Q6MZM0 1159 aa2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 RHBDF2Q6PJF5 856 aa2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 GDPD4Q6W3E5 623 aa2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 ZDHHC23Q8IYP9 409 aa2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 ADGRF3Q8IZF5 1079 aa2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 DPP10Q8N608 796 aa2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 SLC35F5Q8WV83 523 aa2.36□□□□□ -2.03
RNU6-238P-201ENST00000363313 LRTOMTQ8WZ04 291 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms