RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 RTP4Q96DX8 246 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 HNRNPABQ99729 332 aaKnown RBP8.33□□□□□ -1.08
COMMD9-202ENST00000355500 CCDC77Q9BR77 488 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 CNPY3Q9BT09 278 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 NT5C1AQ9BXI3 368 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 ADNPQ9H2P0 1102 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 RSAD1Q9HA92 442 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 CHST7Q9NS84 486 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 HPF1Q9NWY4 346 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 SENP1Q9P0U3 644 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 ANAPC5Q9UJX4 755 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 UBQLN1Q9UMX0 589 aaKnown RBP8.33□□□□□ -1.08
COMMD9-202ENST00000355500 TMEM5Q9Y2B1 443 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 C15orf41Q9Y2V0 281 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 A0A0G2JPF8 293 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 HNRNPCL3B7ZW38 293 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 C9IYK1 514 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 GOLGA8TH3BQL2 631 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 EBAG9O00559 213 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 NVLO15381 856 aaKnown RBP8.33□□□□□ -1.08
COMMD9-202ENST00000355500 FAM155BO75949 473 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 MICAL2O94851 1124 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 ITGB3P05106 788 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 HNRNPCL4P0DMR1 293 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 CLCN4P51793 760 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 DAB2P98082 770 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 CCDC14Q49A88 953 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 CRTC2Q53ET0 693 aaPredicted RBP8.33□□□□□ -1.08
COMMD9-202ENST00000355500 KRBOX4Q5JUW0 171 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 ERMARDQ5T6L9 678 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 AADACL4Q5VUY2 407 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 CLEC2AQ6UVW9 174 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 CHRDL2Q6WN34 429 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 SESTD1Q86VW0 696 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 GFM2Q969S9 779 aaKnown RBP8.33□□□□□ -1.08
COMMD9-202ENST00000355500 SGK3Q96BR1 496 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 DEFB118Q96PH6 123 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 YME1L1Q96TA2 773 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 SLC4A5Q9BY07 1137 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 ELOVL4Q9GZR5 314 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 SDCBP2Q9H190 292 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 EURLQ9NYK6 297 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 ASIC3Q9UHC3 531 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 PHTF1Q9UMS5 762 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 PCDHB3Q9Y5E6 796 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 COL4A6Q14031 1691 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 EVPLQ92817 2033 aa8.33□□□□□ -1.08
COMMD9-202ENST00000355500 LOC105371267A0A1B0GV96 52 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 APOC4-APOC2K7ER74 178 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 RASGRF2O14827 1237 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 RGS16O15492 202 aaPredicted RBP8.32□□□□□ -1.08
COMMD9-202ENST00000355500 USP1O94782 785 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 APOC2P02655 101 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 GNAT1P11488 350 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 DARSP14868 501 aaKnown RBP8.32□□□□□ -1.08
COMMD9-202ENST00000355500 ADCYAP1R1P41586 468 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 PTPN9P43378 593 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 ACADSBP45954 432 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 ITGA8P53708 1063 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 YARSP54577 528 aaKnown RBP8.32□□□□□ -1.08
COMMD9-202ENST00000355500 MRPS15P82914 257 aaKnown RBP8.32□□□□□ -1.08
COMMD9-202ENST00000355500 TFDP2Q14188 446 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 C6orf132Q5T0Z8 1188 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 DPP9Q86TI2 863 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 PASD1Q8IV76 773 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 CCDC50Q8IVM0 306 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 NAXEQ8NCW5 288 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 TRAPPC12Q8WVT3 735 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 FAF2Q96CS3 445 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 CFAP57Q96MR6 1250 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 DDX50Q9BQ39 737 aaKnown RBP8.32□□□□□ -1.08
COMMD9-202ENST00000355500 HINFPQ9BQA5 517 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 UPF3AQ9H1J1 476 aaKnown RBP8.32□□□□□ -1.08
COMMD9-202ENST00000355500 CDC42EP4Q9H3Q1 356 aaKnown RBP8.32□□□□□ -1.08
COMMD9-202ENST00000355500 PRM3Q9NNZ6 103 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 RASSF1Q9NS23 344 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 ZNF180Q9UJW8 692 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 R3HDM2Q9Y2K5 976 aaKnown RBP8.32□□□□□ -1.08
COMMD9-202ENST00000355500 SF3B1O75533 1304 aaKnown RBP eCLIP8.32□□□□□ -1.083e-6■■■■■ 137.9
COMMD9-202ENST00000355500 GMNCA6NCL1 334 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 MOXD2PA6NHM9 499 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 E7ESA3 106 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 HAT1O14929 419 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 MDM4O15151 490 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 SEPT4O43236 478 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 LRCH4O75427 683 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 GOSR1O95249 250 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 TGM2P21980 687 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 CDH3P22223 829 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 PSMA2P25787 234 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 MAGEA6P43360 314 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 YBEYP58557 167 aaPredicted RBP8.32□□□□□ -1.08
COMMD9-202ENST00000355500 RPL7AP62424 266 aaKnown RBP8.32□□□□□ -1.08
COMMD9-202ENST00000355500 OGDHQ02218 1023 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 TEAD4Q15561 434 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 WDR72Q3MJ13 1102 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 ITPRIPL1Q6GPH6 555 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 ARHGAP36Q6ZRI8 547 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 THNSL2Q86YJ6 484 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 CRYBG2Q8N1P7 616 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms