RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 MPOP05164 745 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 RHOCP08134 193 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 SH3BP5LQ7L8J4 393 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 SNX32Q86XE0 403 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 USP6NLQ92738 828 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 GIT1Q9Y2X7 761 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 TLL2Q9Y6L7 1015 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 CRYBG1Q9Y4K1 1723 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 GSC2O15499 205 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 FAM155BO75949 473 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 ERVK-10P10266 1014 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 TSHRP16473 764 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 STMN1P16949 149 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 CAPRIN1Q14444 709 aaKnown RBP12.57□□□□□ -0.4
COLCA1-201ENST00000355430 FAM83EQ2M2I3 478 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 RASAL3Q86YV0 1011 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 A0A096LPK6 155 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 MAFO75444 373 aaPredicted RBP12.57□□□□□ -0.4
COLCA1-201ENST00000355430 CXCL14O95715 111 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 ATP5BP06576 529 aaKnown RBP12.57□□□□□ -0.4
COLCA1-201ENST00000355430 HIST1H2AGP0C0S8 130 aaPredicted RBP12.57□□□□□ -0.4
COLCA1-201ENST00000355430 VCLP18206 1134 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 HIST1H2ADP20671 130 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 ABCG1P45844 678 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 SLC6A3Q01959 620 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 SLC39A12Q504Y0 691 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 OR6Y1Q8NGX8 325 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 HIST1H2AHQ96KK5 128 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 HIST1H2AJQ99878 128 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 H2AFJQ9BTM1 129 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 NRDE2Q9H7Z3 1164 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 LIN7AO14910 233 aaPredicted RBP12.57□□□□□ -0.4
COLCA1-201ENST00000355430 YBX3P16989 372 aaKnown RBP eCLIP12.57□□□□□ -0.4
COLCA1-201ENST00000355430 WEE1P30291 646 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 ZNF143P52747 638 aaPredicted RBP12.57□□□□□ -0.4
COLCA1-201ENST00000355430 CAPSQ13938 189 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 ZC3H12AQ5D1E8 599 aaKnown RBP12.57□□□□□ -0.4
COLCA1-201ENST00000355430 CPNE1Q99829 537 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 FAM192AQ9GZU8 254 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 ARHGEF3Q9NR81 526 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 CHKBQ9Y259 395 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 LYPLA1O75608 230 aaPredicted RBP12.57□□□□□ -0.4
COLCA1-201ENST00000355430 FGF19O95750 216 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 RAB30Q15771 203 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 ANKRD22Q5VYY1 191 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 OTOP2Q7RTS6 562 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 ULK2Q8IYT8 1036 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 PIWIL2Q8TC59 973 aaKnown RBP12.57□□□□□ -0.4
COLCA1-201ENST00000355430 CALML6Q8TD86 181 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 PGLYRP2Q96PD5 576 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 DENND2DQ9H6A0 471 aaPredicted RBP12.57□□□□□ -0.4
COLCA1-201ENST00000355430 PKP3Q9Y446 797 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 MYH7P12883 1935 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 ADGRA2Q96PE1 1338 aa12.57□□□□□ -0.4
COLCA1-201ENST00000355430 GLUD1P00367 558 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 FAM58BPP0C7Q3 252 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 GRIK3Q13003 919 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 CLEC4FQ8N1N0 589 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 DIS3LQ8TF46 1054 aaKnown RBP12.56□□□□□ -0.4
COLCA1-201ENST00000355430 RNF157Q96PX1 679 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 TRAPPC9Q96Q05 1148 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 CDRT15Q96T59 188 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 ECSITQ9BQ95 431 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.56□□□□□ -0.4
COLCA1-201ENST00000355430 PACSIN3Q9UKS6 424 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 RPL26L1Q9UNX3 145 aaKnown RBP12.56□□□□□ -0.4
COLCA1-201ENST00000355430 TRAV19A0A0A6YYK7 116 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 TRIM13O60858 407 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 SUPT7LO94864 414 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 JCHAINP01591 159 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 NFICP08651 508 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 ARHGDIAP52565 204 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 SPANXN3Q5MJ09 141 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 LRRC39Q96DD0 335 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 PDGFCQ9NRA1 345 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 TBC1D23Q9NUY8 699 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 RRN3Q9NYV6 651 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 CLCA2Q9UQC9 943 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 GOLGA8TH3BQL2 631 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 AHCYL1O43865 530 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 ANXA9O76027 345 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 C4BPAP04003 597 aaKnown RBP12.56□□□□□ -0.4
COLCA1-201ENST00000355430 MMP8P22894 467 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 GSTT1P30711 240 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 NR2C2P49116 596 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 ABCE1P61221 599 aaKnown RBP12.56□□□□□ -0.4
COLCA1-201ENST00000355430 EIF2B5Q13144 721 aaKnown RBP12.56□□□□□ -0.4
COLCA1-201ENST00000355430 KCNMB4Q86W47 210 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 CPT1BQ92523 772 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 VPS50Q96JG6 964 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 C12orf42Q96LP6 360 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 TSPAN18Q96SJ8 248 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 RNPEPQ9H4A4 650 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 GID8Q9NWU2 228 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 USP12O75317 370 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 HIRAP54198 1017 aaPredicted RBP12.56□□□□□ -0.4
COLCA1-201ENST00000355430 PKNOX1P55347 436 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 WLSQ5T9L3 541 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 AGAP9Q5VTM2 703 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 PPP2R2DQ66LE6 453 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms