RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 CFAP157Q5JU67 520 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 MARCH8Q5T0T0 291 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 FSTL4Q6MZW2 842 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 TAPT1Q6NXT6 567 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 TMEM135Q86UB9 458 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 TP53INP2Q8IXH6 220 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 NT5C3BQ969T7 300 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 KCNK16Q96T55 309 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 CENPKQ9BS16 269 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 EIF2AQ9BY44 585 aaKnown RBP25.07■■□□□ 1.6
CPNE1-202ENST00000352393 MROH8Q9H579 483 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 ZCWPW2A0A1B0GU75 182 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.07■■□□□ 1.6
CPNE1-202ENST00000352393 DCLK1O15075 740 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 PEX1O43933 1283 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 MPOP05164 745 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 TRIP10Q15642 601 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 SLC27A1Q6PCB7 646 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 EFCAB3Q8N7B9 438 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 NDRG1Q92597 394 aaKnown RBP25.07■■□□□ 1.6
CPNE1-202ENST00000352393 ATXN7L3BQ96GX2 97 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 MAN1C1Q9NR34 630 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 A0A096LPK6 155 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 XPO1O14980 1071 aaKnown RBP25.06■■□□□ 1.6
CPNE1-202ENST00000352393 AP2A1O95782 977 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 SERPINB6P35237 376 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 GNL1P36915 607 aaPredicted RBP25.06■■□□□ 1.6
CPNE1-202ENST00000352393 GTF2A2P52657 109 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 IRF9Q00978 393 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 ADIGQ0VDE8 80 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 FBXO47Q5MNV8 452 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 NME8Q8N427 588 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 HIPK4Q8NE63 616 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 SLC7A14Q8TBB6 771 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 FAM149B1Q96BN6 582 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 NPY6RQ99463 290 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 KPNA7A9QM74 516 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 CREB3O43889 395 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 H2AFYO75367 372 aaKnown RBP25.06■■□□□ 1.6
CPNE1-202ENST00000352393 VCLP18206 1134 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 PTPN3P26045 913 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 GSTT1P30711 240 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 DLG1Q12959 904 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 DCAF6Q58WW2 860 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 ALKAL1Q6UXT8 129 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 PID1Q7Z2X4 250 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 PIGZQ86VD9 579 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 TDRD5Q8NAT2 981 aaKnown RBP25.06■■□□□ 1.6
CPNE1-202ENST00000352393 OR52B2Q96RD2 323 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 AGAP2Q99490 1192 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 CASS4Q9NQ75 786 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 VANGL2Q9ULK5 521 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 HES2Q9Y543 173 aa25.06■■□□□ 1.6
CPNE1-202ENST00000352393 ZNF236Q9UL36 1845 aa25.05■■□□□ 1.6
CPNE1-202ENST00000352393 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-202ENST00000352393 KCNK1O00180 336 aa25.05■■□□□ 1.6
CPNE1-202ENST00000352393 PIRO00625 290 aa25.05■■□□□ 1.6
CPNE1-202ENST00000352393 CXCL11O14625 94 aa25.05■■□□□ 1.6
CPNE1-202ENST00000352393 SPTLC1O15269 473 aa25.05■■□□□ 1.6
CPNE1-202ENST00000352393 F7P08709 466 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-202ENST00000352393 GRIK4Q16099 956 aa25.05■■□□□ 1.6
CPNE1-202ENST00000352393 ZNF618Q5T7W0 954 aa25.05■■□□□ 1.6
CPNE1-202ENST00000352393 MAP3K21Q5TCX8 1036 aa25.05■■□□□ 1.6
CPNE1-202ENST00000352393 MCMBPQ9BTE3 642 aa25.05■■□□□ 1.6
CPNE1-202ENST00000352393 KLHL8Q9P2G9 620 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-202ENST00000352393 EEF2KO00418 725 aaKnown RBP25.04■■□□□ 1.6
CPNE1-202ENST00000352393 TRIM13O60858 407 aa25.04■■□□□ 1.6
CPNE1-202ENST00000352393 USP12O75317 370 aa25.04■■□□□ 1.6
CPNE1-202ENST00000352393 DLG2Q15700 870 aa25.04■■□□□ 1.6
CPNE1-202ENST00000352393 KIZQ2M2Z5 673 aa25.04■■□□□ 1.6
CPNE1-202ENST00000352393 ANKRD20A4Q4UJ75 823 aa25.04■■□□□ 1.6
CPNE1-202ENST00000352393 OGFRL1Q5TC84 451 aaPredicted RBP25.04■■□□□ 1.6
CPNE1-202ENST00000352393 SDCCAG8Q86SQ7 713 aaPredicted RBP25.04■■□□□ 1.6
CPNE1-202ENST00000352393 EMID1Q96A84 441 aaPredicted RBP25.04■■□□□ 1.6
CPNE1-202ENST00000352393 BTBD9Q96Q07 612 aa25.04■■□□□ 1.6
CPNE1-202ENST00000352393 SNX25Q9H3E2 840 aa25.04■■□□□ 1.6
CPNE1-202ENST00000352393 CAB39LQ9H9S4 337 aa25.04■■□□□ 1.6
CPNE1-202ENST00000352393 TCF7L2Q9NQB0 619 aa25.04■■□□□ 1.6
CPNE1-202ENST00000352393 UBQLN1Q9UMX0 589 aaKnown RBP25.04■■□□□ 1.6
CPNE1-202ENST00000352393 SSX2IPQ9Y2D8 614 aa25.04■■□□□ 1.6
CPNE1-202ENST00000352393 NOS2P35228 1153 aa25.04■■□□□ 1.6
CPNE1-202ENST00000352393 LIMS2Q7Z4I7 341 aa25.04■■□□□ 1.6
CPNE1-202ENST00000352393 ERO1BQ86YB8 467 aa25.04■■□□□ 1.6
CPNE1-202ENST00000352393 URGCPQ8TCY9 931 aa25.04■■□□□ 1.6
CPNE1-202ENST00000352393 CNDP1Q96KN2 507 aa25.04■■□□□ 1.6
CPNE1-202ENST00000352393 LENG8Q96PV6 779 aaPredicted RBP25.04■■□□□ 1.6
CPNE1-202ENST00000352393 GATA5Q9BWX5 397 aaPredicted RBP25.04■■□□□ 1.6
CPNE1-202ENST00000352393 RNF19AQ9NV58 838 aa25.04■■□□□ 1.6
CPNE1-202ENST00000352393 GDAP2Q9NXN4 497 aa25.04■■□□□ 1.6
CPNE1-202ENST00000352393 BFARQ9NZS9 450 aa25.04■■□□□ 1.6
CPNE1-202ENST00000352393 CPSF2Q9P2I0 782 aaKnown RBP25.04■■□□□ 1.6
CPNE1-202ENST00000352393 SYNJ2BP-COX16A0A087WUM0 186 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 H3BRB1 525 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 CAPN15O75808 1086 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 ZNF189O75820 626 aaPredicted RBP25.03■■□□□ 1.6
CPNE1-202ENST00000352393 RECQL4O94761 1208 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 LTFP02788 710 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 GRIA2P42262 883 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 KCTD11Q693B1 232 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 SREK1Q8WXA9 508 aaKnown RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms