RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 EGFL7Q9UHF1 273 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 CDH22Q9UJ99 828 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 TUBGCP6Q96RT7 1819 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 MYH1P12882 1939 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 MYH4Q9Y623 1939 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 LRP6O75581 1613 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 TRPC5OSA6NMA1 111 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 TK2O00142 265 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 LAMC2Q13753 1193 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 CCDC153Q494R4 210 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 SCIMPQ6UWF3 145 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 ULK4Q96C45 1275 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 CSPG4P5Q96PW8 444 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 AGAP2Q99490 1192 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 MAGEB5Q9BZ81 275 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 CDHR5Q9HBB8 845 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 DDX43Q9NXZ2 648 aaKnown RBP12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 XPR1Q9UBH6 696 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 SLC15A5A6NIM6 579 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 GRIN3BO60391 1043 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 LINGO3P0C6S8 592 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 TGFB3P10600 412 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 GRIA3P42263 894 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 GABRB2P47870 512 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 OCA2Q04671 838 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 PRKD1Q15139 912 aaPredicted RBP12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 IMPG1Q17R60 797 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 SV2CQ496J9 727 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 CATSPERGQ6ZRH7 1159 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 FBXO27Q8NI29 283 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 CPNE1Q99829 537 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 POMKQ9H5K3 350 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 ABI2Q9NYB9 513 aaPredicted RBP12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 ITGA11Q9UKX5 1188 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 MRASO14807 208 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 TNFAIP8O95379 198 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 PIK3R1P27986 724 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 ABL2P42684 1182 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 TAS1R3Q7RTX0 852 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 GPR141Q7Z602 305 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 MYO1HQ8N1T3 1032 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 CCDC185Q8N715 623 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 TMPRSS4Q9NRS4 437 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 COPG2Q9UBF2 871 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 HEATR9A2RTY3 570 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 HCRTO43612 131 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 MFSD11O43934 449 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 NPM3O75607 178 aaKnown RBP12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 VAV1P15498 845 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 GM2AP17900 193 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 NR2C2P49116 596 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 ZNF460Q14592 562 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 TREML2Q5T2D2 321 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 AGAP9Q5VTM2 703 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 CWF19L1Q69YN2 538 aaKnown RBP12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 MIER2Q8N344 545 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 DTNBP1Q96EV8 351 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 FAM192AQ9GZU8 254 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 TKTL2Q9H0I9 626 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 CYLDQ9NQC7 956 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 PRG3Q9Y2Y8 225 aaPredicted RBP12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 IRF6O14896 467 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 HDAC3O15379 428 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 CILPO75339 1184 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 PIRTP0C851 137 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 T-ENOLP0DO92 83 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 UQCRBP14927 111 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 ARL2P36404 184 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 NOVP48745 357 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 FKBP1AP62942 108 aaKnown RBP12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 CDH17Q12864 832 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 ATP1A4Q13733 1029 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 KYAT1Q16773 422 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 ARCQ7LC44 396 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 THEM5Q8N1Q8 247 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 SYNPO2Q9UMS6 1093 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 POMPQ9Y244 141 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 MYO9BQ13459 2157 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 STX16-NPEPL1H3BU86 382 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 PLIN3O60664 434 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 MT-ND1P03886 318 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 CHRM3P20309 590 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 CRHR1P34998 444 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 KRT72Q14CN4 511 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 DNAJC14Q6Y2X3 702 aaPredicted RBP12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 APLFQ8IW19 511 aaPredicted RBP12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 PQLC1Q8N2U9 271 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 FAXDC2Q96IV6 333 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 C7orf26Q96N11 449 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 PANX3Q96QZ0 392 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 CIB1Q99828 191 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 GORASP1Q9BQQ3 440 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 DPEP3Q9H4B8 488 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 TUBGCP4Q9UGJ1 667 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 TNFSF13BQ9Y275 285 aa12.66□□□□□ -0.38
SNRNP48-201ENST00000342415 NDUFS3O75489 264 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 CHRNGP07510 517 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 TUBP50607 506 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 WSCD1Q658N2 575 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms