RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 STRA8Q7Z7C7 330 aa19.52■□□□□ 0.71
RTN4-201ENST00000317610 TMEM135Q86UB9 458 aa19.52■□□□□ 0.71
RTN4-201ENST00000317610 CPSF7Q8N684 471 aaKnown RBP19.52■□□□□ 0.71
RTN4-201ENST00000317610 B4GALNT2Q8NHY0 566 aa19.52■□□□□ 0.71
RTN4-201ENST00000317610 RP9Q8TA86 221 aaKnown RBP19.52■□□□□ 0.71
RTN4-201ENST00000317610 ZNF385DQ9H6B1 395 aa19.52■□□□□ 0.71
RTN4-201ENST00000317610 PTTG2Q9NZH5 202 aa19.52■□□□□ 0.71
RTN4-201ENST00000317610 ATXN10Q9UBB4 475 aa19.52■□□□□ 0.71
RTN4-201ENST00000317610 RIMS3Q9UJD0 308 aa19.52■□□□□ 0.71
RTN4-201ENST00000317610 CAPNS1P04632 268 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 TFAP2AP05549 437 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 NUDT2P50583 147 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 SMAD1Q15797 465 aaKnown RBP19.51■□□□□ 0.71
RTN4-201ENST00000317610 ZNF423Q2M1K9 1284 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 PIGGQ5H8A4 983 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 ANKRD52Q8NB46 1076 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 KYQ8NBH2 561 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.51■□□□□ 0.713e-10■■■■■ 28.4
RTN4-201ENST00000317610 CATSPER1Q8NEC5 780 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 COPS5Q92905 334 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 MCMBPQ9BTE3 642 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 GATA5Q9BWX5 397 aaPredicted RBP19.51■□□□□ 0.71
RTN4-201ENST00000317610 ERAP1Q9NZ08 941 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 UBAP1Q9NZ09 502 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 ZNF638Q14966 1978 aaKnown RBP19.51■□□□□ 0.71
RTN4-201ENST00000317610 TSPAN1O60635 241 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 SPATA31D3P0C874 917 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 CD1EP15812 388 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 PMLP29590 882 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 ADSLP30566 484 aaPredicted RBP19.51■□□□□ 0.71
RTN4-201ENST00000317610 GRM5P41594 1212 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 BCAT1P54687 386 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 MAP7Q14244 749 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 RARS2Q5T160 578 aaKnown RBP19.51■□□□□ 0.71
RTN4-201ENST00000317610 ARMC3Q5W041 872 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 SPATA31D4Q6ZUB0 917 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 SNX32Q86XE0 403 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 DSELQ8IZU8 1212 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 CEP41Q9BYV8 373 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 ILKAPQ9H0C8 392 aaPredicted RBP19.51■□□□□ 0.71
RTN4-201ENST00000317610 OXSMQ9NWU1 459 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 DERAQ9Y315 318 aa19.51■□□□□ 0.71
RTN4-201ENST00000317610 ZCWPW2A0A1B0GU75 182 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 PPEF2O14830 753 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 AIM2O14862 343 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 VILLO15195 856 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 INSRRP14616 1297 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 SERPINB5P36952 375 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 MATKP42679 507 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 ACADSBP45954 432 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 IRF9Q00978 393 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 IFRD2Q12894 506 aaPredicted RBP19.5■□□□□ 0.71
RTN4-201ENST00000317610 PAFAH1B3Q15102 231 aaKnown RBP19.5■□□□□ 0.71
RTN4-201ENST00000317610 BNC2Q6ZN30 1099 aaPredicted RBP19.5■□□□□ 0.71
RTN4-201ENST00000317610 SETD3Q86TU7 594 aaPredicted RBP19.5■□□□□ 0.71
RTN4-201ENST00000317610 AHI1Q8N157 1196 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 C7orf31Q8N865 590 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 ADCY4Q8NFM4 1077 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 RNF139Q8WU17 664 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 ZNF669Q96BR6 464 aaPredicted RBP19.5■□□□□ 0.71
RTN4-201ENST00000317610 LPIN3Q9BQK8 851 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 PDGFDQ9GZP0 370 aaPredicted RBP19.5■□□□□ 0.71
RTN4-201ENST00000317610 R3HDMLQ9H3Y0 253 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 DPEP3Q9H4B8 488 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 PRDM12Q9H4Q4 367 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 ZNF696Q9H7X3 374 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 NMRAL1Q9HBL8 299 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 MID2Q9UJV3 735 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 TMCO1Q9UM00 188 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 RAP2CQ9Y3L5 183 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 HDAC3O15379 428 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 PGM3O95394 542 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 CRTAMO95727 393 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 LTFP02788 710 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 LCP1P13796 627 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 CSRP3P50461 194 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 THOP1P52888 689 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 IGBP1P78318 339 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 CREB5Q02930 508 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 HERC3Q15034 1050 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 USP41Q3LFD5 358 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 FAM131BQ86XD5 332 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 OR52K1Q8NGK4 314 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 URGCPQ8TCY9 931 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 PPP1R16BQ96T49 567 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 OCEL1Q9H607 264 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 CLIC5Q9NZA1 410 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 BCAP29Q9UHQ4 241 aa19.5■□□□□ 0.71
RTN4-201ENST00000317610 C2P06681 752 aa19.49■□□□□ 0.71
RTN4-201ENST00000317610 CSE1LP55060 971 aaKnown RBP19.49■□□□□ 0.71
RTN4-201ENST00000317610 CNGA3Q16281 694 aa19.49■□□□□ 0.71
RTN4-201ENST00000317610 SLC25A52Q3SY17 297 aa19.49■□□□□ 0.71
RTN4-201ENST00000317610 FBXO16Q8IX29 292 aaPredicted RBP19.49■□□□□ 0.71
RTN4-201ENST00000317610 LRRC52Q8N7C0 313 aa19.49■□□□□ 0.71
RTN4-201ENST00000317610 RDH11Q8TC12 318 aa19.49■□□□□ 0.71
RTN4-201ENST00000317610 KBTBD7Q8WVZ9 684 aa19.49■□□□□ 0.71
RTN4-201ENST00000317610 ZFRQ96KR1 1074 aaKnown RBP19.49■□□□□ 0.71
RTN4-201ENST00000317610 HSFY1Q96LI6 401 aa19.49■□□□□ 0.71
RTN4-201ENST00000317610 LRGUKQ96M69 825 aa19.49■□□□□ 0.71
RTN4-201ENST00000317610 AGAP2Q99490 1192 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms