RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 CNPPD1Q9BV87 410 aa8.5□□□□□ -1.05
PCDHB1-201ENST00000306549 BCL2L14Q9BZR8 327 aa8.5□□□□□ -1.05
PCDHB1-201ENST00000306549 REXO4Q9GZR2 422 aaKnown RBP8.5□□□□□ -1.05
PCDHB1-201ENST00000306549 ZNF304Q9HCX3 659 aa8.5□□□□□ -1.05
PCDHB1-201ENST00000306549 TBC1D23Q9NUY8 699 aa8.5□□□□□ -1.05
PCDHB1-201ENST00000306549 SDR42E2A6NKP2 422 aa8.5□□□□□ -1.05
PCDHB1-201ENST00000306549 GUCY1B2O75343 617 aa8.5□□□□□ -1.05
PCDHB1-201ENST00000306549 PABPC1P11940 636 aaKnown RBP8.5□□□□□ -1.05
PCDHB1-201ENST00000306549 SSTR3P32745 418 aaPredicted RBP8.5□□□□□ -1.05
PCDHB1-201ENST00000306549 RXRGP48443 463 aa8.5□□□□□ -1.05
PCDHB1-201ENST00000306549 TOB1P50616 345 aaPredicted RBP8.5□□□□□ -1.05
PCDHB1-201ENST00000306549 TRIM32Q13049 653 aa8.5□□□□□ -1.05
PCDHB1-201ENST00000306549 KLHL35Q6PF15 583 aa8.5□□□□□ -1.05
PCDHB1-201ENST00000306549 TRAF7Q6Q0C0 670 aa8.5□□□□□ -1.05
PCDHB1-201ENST00000306549 FUBP3Q96I24 572 aaKnown RBP eCLIP8.5□□□□□ -1.05
PCDHB1-201ENST00000306549 DZANK1Q9NVP4 752 aa8.5□□□□□ -1.05
PCDHB1-201ENST00000306549 GRID1Q9ULK0 1009 aa8.5□□□□□ -1.05
PCDHB1-201ENST00000306549 TM9SF1O15321 606 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 SERPINB1P30740 379 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 MLH1P40692 756 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 PRKAA2P54646 552 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 AGMOQ6ZNB7 445 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 BEND7Q8N7W2 519 aaPredicted RBP8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 SH3GL2Q99962 352 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 HSD17B14Q9BPX1 270 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 WHRNQ9P202 907 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 PSMC3IPQ9P2W1 217 aaPredicted RBP8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 AP4E1Q9UPM8 1137 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 KLHL20Q9Y2M5 609 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 ZNF831Q5JPB2 1677 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 GNG14A0A1W2PPG7 69 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 CXCL14O95715 111 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 CAPN1P07384 714 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 PWP1Q13610 501 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 GRB14Q14449 540 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 C3orf20Q8ND61 904 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 SLC30A5Q8TAD4 765 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 REPS1Q96D71 796 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 GMNCA6NCL1 334 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 TBC1D3BA6NDS4 549 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 ANKRD52Q8NB46 1076 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 PPP1R36Q96LQ0 422 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 OMDQ99983 421 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 PIGUQ9H490 435 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 ARL2BPQ9Y2Y0 163 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 ATAD5Q96QE3 1844 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 CASP1P29466 404 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 RIN3Q8TB24 985 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 ETNPPLQ8TBG4 499 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 THUMPD3Q9BV44 507 aaKnown RBP8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 ATP13A3Q9H7F0 1226 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 FAM237AA0A1B0GTK4 181 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 CST8O60676 142 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 MSH3P20585 1137 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 STX4Q12846 297 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 NAB1Q13506 487 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 IFNEQ86WN2 208 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 TRABDQ9H4I3 376 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 FAM205CA6NFA0 338 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 SLC6A3Q01959 620 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 WDR36Q8NI36 951 aaKnown RBP8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 IRGQQ8WZA9 623 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 ZNF333Q96JL9 665 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 ALG6Q9Y672 507 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 HNRNPCP07910 306 aaKnown RBP eCLIP8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 HDCP19113 662 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 IFNGR2P38484 337 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 DDX39BQ13838 428 aaKnown RBP8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 C11orf74Q86VG3 221 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 ZNF606Q8WXB4 792 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 REXO5Q96IC2 774 aaKnown RBP8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 GANQ9H2C0 597 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 VIPAS39Q9H9C1 493 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 ETNK1Q9HBU6 452 aa8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 MAFBQ9Y5Q3 323 aaPredicted RBP8.49□□□□□ -1.05
PCDHB1-201ENST00000306549 FAM220BPB1ANY3 271 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 PCNAP12004 261 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 ACLYP53396 1101 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 CENPXA8MT69 81 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 CYP2A7P20853 494 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 PPP2R2DQ66LE6 453 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 UBE2E3Q969T4 207 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 EMID1Q96A84 441 aaPredicted RBP8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 SERAC1Q96JX3 654 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 PACSIN1Q9BY11 444 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 PDGFDQ9GZP0 370 aaPredicted RBP8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 COL5A3P25940 1745 aaPredicted RBP8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 TMEM191CA6NGB0 347 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 GLRA2P23416 452 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 PBLDP30039 288 aaPredicted RBP8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 HSPA13P48723 471 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 IL2P60568 153 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 NEK5Q6P3R8 708 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 PTF1AQ7RTS3 328 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 TPCN2Q8NHX9 752 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 BLOC1S5Q8TDH9 187 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 FAM172AQ8WUF8 416 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 STARD8Q92502 1023 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms