RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 ABCC13Q9NSE7 274 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 KLQ9UEF7 1012 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 EVLQ9UI08 416 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-201ENST00000303354 PCDHA11Q9Y5I1 949 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 NRCAMQ92823 1304 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 CPED1A4D0V7 1026 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 GLTPD2A6NH11 291 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 PIK3CGP48736 1102 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 CAMKK2Q96RR4 588 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 ADI1Q9BV57 179 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 TBC1D13Q9NVG8 400 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 SNX6Q9UNH7 406 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 ADCY6O43306 1168 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 F9P00740 461 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 SCNN1AP37088 669 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 CRATP43155 626 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 NRLP54845 237 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 EIF2B5Q13144 721 aaKnown RBP7.94□□□□□ -1.14
SCN9A-201ENST00000303354 ZNF786Q8N393 782 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 ATG16L2Q8NAA4 619 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 RNASE11Q8TAA1 199 aaKnown RBP7.94□□□□□ -1.14
SCN9A-201ENST00000303354 ELOVL4Q9GZR5 314 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 RMND5AQ9H871 391 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 ZFP14Q9HCL3 533 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 CYLDQ9NQC7 956 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 ITPKBP27987 946 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 CTSOP43234 321 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-201ENST00000303354 IL27RAQ6UWB1 636 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 NOA1Q8NC60 698 aaKnown RBP7.94□□□□□ -1.14
SCN9A-201ENST00000303354 FAM105AQ9NUU6 356 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 NSMCE4AQ9NXX6 385 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 NCDNQ9UBB6 729 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 SIK3Q9Y2K2 1263 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 C1orf232A0A0U1RR37 186 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 MRPS15P82914 257 aaKnown RBP7.94□□□□□ -1.14
SCN9A-201ENST00000303354 TRIP10Q15642 601 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 DGKKQ5KSL6 1271 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 USP38Q8NB14 1042 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 SERPINB11Q96P15 392 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 ZSWIM1Q9BR11 485 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 PAPOLBQ9NRJ5 636 aaKnown RBP7.94□□□□□ -1.14
SCN9A-201ENST00000303354 TAS2R14Q9NYV8 317 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 NOP53Q9NZM5 478 aaKnown RBP7.94□□□□□ -1.14
SCN9A-201ENST00000303354 PHTF1Q9UMS5 762 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 CAPN6Q9Y6Q1 641 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 USP1O94782 785 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 MDH1P40925 334 aaKnown RBP7.94□□□□□ -1.14
SCN9A-201ENST00000303354 SERPINB8P50452 374 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 HSDL1Q3SXM5 330 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 ILKAPQ9H0C8 392 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-201ENST00000303354 TMCC3Q9ULS5 477 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 SF3B1O75533 1304 aaKnown RBP eCLIP7.94□□□□□ -1.14
SCN9A-201ENST00000303354 TTC24A2A3L6 582 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-201ENST00000303354 SAC3D1A6NKF1 404 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 AKT2P31751 481 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 TCHHL1Q5QJ38 904 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-201ENST00000303354 PDPK2PQ6A1A2 396 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 MFSD7Q6UXD7 560 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 NAPRTQ6XQN6 538 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 SYT12Q8IV01 421 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 ZNF366Q8N895 744 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 ARL14EPQ8N8R7 260 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-201ENST00000303354 RIMBP3CA6NJZ7 1639 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 RIMBP3BA6NNM3 1639 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 RIMBP3Q9UFD9 1639 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 FGFR3P22607 806 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 MIPP30301 263 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 OTUD3Q5T2D3 398 aaPredicted RBP7.93□□□□□ -1.14
SCN9A-201ENST00000303354 EPHX4Q8IUS5 362 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 ERP44Q9BS26 406 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 SNX13Q9Y5W8 968 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 STON1Q9Y6Q2 735 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 LAMC1P11047 1609 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 FBXO21O94952 628 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 SLC12A3P55017 1021 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 CAPSQ13938 189 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 KIAA0895Q8NCT3 520 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 FAM120BQ96EK7 910 aaKnown RBP7.93□□□□□ -1.14
SCN9A-201ENST00000303354 PPP1R16AQ96I34 528 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 OR12D3Q9UGF7 316 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 ACKR2O00590 384 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 MMP3P08254 477 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 ZNF7P17097 686 aaPredicted RBP7.93□□□□□ -1.14
SCN9A-201ENST00000303354 SERPINA4P29622 427 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 CLK1P49759 484 aaKnown RBP7.93□□□□□ -1.14
SCN9A-201ENST00000303354 INHBEP58166 350 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 LPIN1Q14693 890 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 SEC23AQ15436 765 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 CRY1Q16526 586 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 SLC45A4Q5BKX6 768 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 EEF1DP3Q658K8 133 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 TAF2Q6P1X5 1199 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 CDHR5Q9HBB8 845 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 GMIPQ9P107 970 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 CYP3A4P08684 503 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 RPA3P35244 121 aaPredicted RBP7.93□□□□□ -1.14
SCN9A-201ENST00000303354 SLC26A2P50443 739 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 GRM2Q14416 872 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 LPAL2Q16609 132 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 PREPLQ4J6C6 727 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms