RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 RGS10O43665 173 aa12.65□□□□□ -0.38
SLX4-201ENST00000294008 RPS6KA4O75676 772 aa12.65□□□□□ -0.38
SLX4-201ENST00000294008 RLN1P04808 185 aa12.65□□□□□ -0.38
SLX4-201ENST00000294008 SEL1L3Q68CR1 1132 aa12.65□□□□□ -0.38
SLX4-201ENST00000294008 KCNB2Q92953 911 aa12.65□□□□□ -0.38
SLX4-201ENST00000294008 NMD3Q96D46 503 aaKnown RBP12.65□□□□□ -0.38
SLX4-201ENST00000294008 MTMR8Q96EF0 704 aa12.65□□□□□ -0.38
SLX4-201ENST00000294008 ABI3Q9P2A4 366 aa12.65□□□□□ -0.38
SLX4-201ENST00000294008 IFT52Q9Y366 437 aa12.65□□□□□ -0.38
SLX4-201ENST00000294008 TBX22Q9Y458 520 aa12.65□□□□□ -0.38
SLX4-201ENST00000294008 RSL1D1O76021 490 aaKnown RBP12.65□□□□□ -0.39
SLX4-201ENST00000294008 IFNA6P05013 189 aa12.65□□□□□ -0.39
SLX4-201ENST00000294008 FDFT1P37268 417 aa12.65□□□□□ -0.39
SLX4-201ENST00000294008 BUD31P41223 144 aaPredicted RBP12.65□□□□□ -0.39
SLX4-201ENST00000294008 CHN2P52757 468 aa12.65□□□□□ -0.39
SLX4-201ENST00000294008 TBX4P57082 545 aa12.65□□□□□ -0.39
SLX4-201ENST00000294008 TREML1Q86YW5 311 aa12.65□□□□□ -0.39
SLX4-201ENST00000294008 DGCR6LQ9BY27 220 aa12.65□□□□□ -0.39
SLX4-201ENST00000294008 SH3BGRL2Q9UJC5 107 aa12.65□□□□□ -0.39
SLX4-201ENST00000294008 TBC1D10CQ8IV04 446 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 HIST1H2AAQ96QV6 131 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 ALG6Q9Y672 507 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 COL17A1Q9UMD9 1497 aaPredicted RBP12.64□□□□□ -0.39
SLX4-201ENST00000294008 BTN3A1O00481 513 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 TM9SF1O15321 606 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 CCNG2Q16589 344 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 MEA1Q16626 185 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 SLC39A12Q504Y0 691 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 MAGEC3Q8TD91 643 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 TSEN15Q8WW01 171 aaKnown RBP12.64□□□□□ -0.39
SLX4-201ENST00000294008 LMAN2LQ9H0V9 348 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 CRISPLD1Q9H336 500 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 BPIFA1Q9NP55 256 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 MID1IP1Q9NPA3 183 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 MRPL17Q9NRX2 175 aaKnown RBP12.64□□□□□ -0.39
SLX4-201ENST00000294008 RNF19AQ9NV58 838 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 ZNF70Q9UC06 446 aaPredicted RBP12.64□□□□□ -0.39
SLX4-201ENST00000294008 NUP50Q9UKX7 468 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 TMCO1Q9UM00 188 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 TOPBP1Q92547 1522 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 NR2F1P10589 423 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 CTSOP43234 321 aaPredicted RBP12.64□□□□□ -0.39
SLX4-201ENST00000294008 CCL23P55773 120 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 GJB7Q6PEY0 223 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 DNAJB3Q8WWF6 145 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 RBM22Q9NW64 420 aaKnown RBP eCLIP12.64□□□□□ -0.39
SLX4-201ENST00000294008 SETD1BQ9UPS6 1966 aaKnown RBP12.64□□□□□ -0.39
SLX4-201ENST00000294008 PNMA8CA0A1B0GUJ8 204 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 SPATA31D3P0C874 917 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 PTPN5P54829 565 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 MTTPP55157 894 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 CRY1Q16526 586 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 SPATA31D4Q6ZUB0 917 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 SNX20Q7Z614 316 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 SATL1Q86VE3 508 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 PPIL6Q8IXY8 311 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 RNF145Q96MT1 663 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 PHF20Q9BVI0 1012 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 PLEKHA1Q9HB21 404 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 C8orf4Q9NR00 106 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 PARPBPQ9NWS1 579 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 PCP4L1A6NKN8 68 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 NCAM2O15394 837 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 ATP8B1O43520 1251 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 GNALP38405 381 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 TKTL1P51854 596 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 CHAF1BQ13112 559 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 TBX2Q13207 712 aaPredicted RBP12.64□□□□□ -0.39
SLX4-201ENST00000294008 ITGA9Q13797 1035 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 NAA30Q147X3 362 aaPredicted RBP12.64□□□□□ -0.39
SLX4-201ENST00000294008 PKN1Q16512 942 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 ARMCX6Q7L4S7 300 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 FEZF2Q8TBJ5 459 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 CELF4Q9BZC1 486 aaKnown RBP12.64□□□□□ -0.39
SLX4-201ENST00000294008 OSER1Q9NX31 292 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 MOCS1Q9NZB8 636 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 PCDHB5Q9Y5E4 795 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 FFAR2O15552 330 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 CFIP05156 583 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 TGFBR2P37173 567 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 MAGEA9P43362 315 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 ITGA1P56199 1179 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 GEMIN4P57678 1058 aaKnown RBP12.64□□□□□ -0.39
SLX4-201ENST00000294008 MPP2Q14168 576 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 MYBPC3Q14896 1274 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 SGCBQ16585 318 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 MZT2AQ6P582 158 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 CRTC3Q6UUV7 619 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 IL27RAQ6UWB1 636 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 BNC2Q6ZN30 1099 aaPredicted RBP12.64□□□□□ -0.39
SLX4-201ENST00000294008 ZZZ3Q8IYH5 903 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 SSH3Q8TE77 659 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 BARHL2Q9NY43 387 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 CDH9Q9ULB4 789 aa12.64□□□□□ -0.39
SLX4-201ENST00000294008 RGS14O43566 566 aa12.63□□□□□ -0.39
SLX4-201ENST00000294008 MSL3P1P0C860 447 aa12.63□□□□□ -0.39
SLX4-201ENST00000294008 FGFR3P22607 806 aa12.63□□□□□ -0.39
SLX4-201ENST00000294008 FAPQ12884 760 aa12.63□□□□□ -0.39
SLX4-201ENST00000294008 PPIL2Q13356 520 aa12.63□□□□□ -0.39
SLX4-201ENST00000294008 GRM4Q14833 912 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms